Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQN75_RS03040 Genome accession   NZ_LS483420
Coordinates   581869..582906 (+) Length   345 a.a.
NCBI ID   WP_111684731.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13739     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 576869..587906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS03015 (NCTC13739_00592) - 577133..578464 (+) 1332 WP_111684729.1 dipeptidase -
  DQN75_RS03020 (NCTC13739_00593) arcC 578484..579434 (+) 951 WP_010922501.1 carbamate kinase -
  DQN75_RS03025 (NCTC13739_00594) asnA 579747..580739 (+) 993 WP_023611792.1 aspartate--ammonia ligase -
  DQN75_RS03030 (NCTC13739_00595) rsmD 580862..581401 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQN75_RS03035 (NCTC13739_00596) coaD 581391..581882 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  DQN75_RS03040 (NCTC13739_00597) sepM 581869..582906 (+) 1038 WP_111684731.1 SepM family pheromone-processing serine protease Regulator
  DQN75_RS03045 (NCTC13739_00598) - 583308..584285 (+) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  DQN75_RS03050 (NCTC13739_00599) - 584733..585353 (+) 621 WP_002992791.1 YutD family protein -
  DQN75_RS03055 (NCTC13739_00600) rlmN 585357..586469 (+) 1113 WP_111684733.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQN75_RS03060 (NCTC13739_00601) - 586517..587143 (-) 627 WP_002983834.1 prepilin peptidase -
  DQN75_RS03065 (NCTC13739_00602) - 587371..587898 (+) 528 WP_002983837.1 Dps family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.27 Da        Isoelectric Point: 9.6692

>NTDB_id=1141001 DQN75_RS03040 WP_111684731.1 581869..582906(+) (sepM) [Streptococcus pyogenes strain NCTC13739]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTIQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRS
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1141001 DQN75_RS03040 WP_111684731.1 581869..582906(+) (sepM) [Streptococcus pyogenes strain NCTC13739]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGCAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGATTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCCAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGTCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.696

100

0.687


Multiple sequence alignment