Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN75_RS02205 Genome accession   NZ_LS483420
Coordinates   418211..418936 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13739     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 413211..423936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS02175 (NCTC13739_00432) - 413391..414851 (+) 1461 WP_012560892.1 NCS2 family permease -
  DQN75_RS02180 (NCTC13739_00433) tsaE 415004..415465 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN75_RS02185 (NCTC13739_00434) - 415440..415964 (+) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  DQN75_RS02190 (NCTC13739_00435) brpA 415973..417256 (+) 1284 WP_014411892.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN75_RS02195 (NCTC13739_00436) - 417367..417723 (-) 357 WP_014407784.1 hypothetical protein -
  DQN75_RS02200 (NCTC13739_00437) - 417720..418139 (-) 420 WP_002983376.1 HIT family protein -
  DQN75_RS02205 (NCTC13739_00438) pptA 418211..418936 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN75_RS02210 (NCTC13739_00439) - 418939..419973 (+) 1035 WP_111684628.1 ABC transporter permease -
  DQN75_RS02215 (NCTC13739_00440) ccrZ 420037..420828 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN75_RS02220 (NCTC13739_00441) trmB 420828..421463 (+) 636 WP_111684630.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN75_RS02230 (NCTC13739_00443) rimP 421722..422258 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQN75_RS02235 (NCTC13739_00444) nusA 422433..423590 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN75_RS02240 (NCTC13739_00445) rnpM 423606..423902 (+) 297 WP_111684632.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1140996 DQN75_RS02205 WP_002983379.1 418211..418936(+) (pptA) [Streptococcus pyogenes strain NCTC13739]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140996 DQN75_RS02205 WP_002983379.1 418211..418936(+) (pptA) [Streptococcus pyogenes strain NCTC13739]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment