Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN57_RS07160 Genome accession   NZ_LS483415
Coordinates   1373698..1374423 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8304     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368698..1379423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN57_RS07130 (NCTC8304_01425) - 1368916..1369773 (+) 858 WP_111705754.1 DNA adenine methylase -
  DQN57_RS07135 (NCTC8304_01426) - 1369894..1370973 (+) 1080 WP_002983389.1 site-specific integrase -
  DQN57_RS07145 (NCTC8304_01428) trmB 1371171..1371806 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN57_RS07150 (NCTC8304_01429) ccrZ 1371806..1372597 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN57_RS07155 (NCTC8304_01430) - 1372661..1373695 (-) 1035 WP_023079963.1 ABC transporter permease -
  DQN57_RS07160 (NCTC8304_01431) pptA 1373698..1374423 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN57_RS07165 (NCTC8304_01432) - 1374495..1374914 (+) 420 WP_002983376.1 HIT family protein -
  DQN57_RS07170 (NCTC8304_01433) - 1374911..1375267 (+) 357 WP_002988657.1 hypothetical protein -
  DQN57_RS07175 (NCTC8304_01434) brpA 1375378..1376628 (-) 1251 WP_111705755.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN57_RS07180 (NCTC8304_01435) - 1376637..1377161 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQN57_RS07185 (NCTC8304_01436) tsaE 1377136..1377597 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN57_RS07190 (NCTC8304_01437) - 1377751..1379211 (-) 1461 WP_111705756.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1140832 DQN57_RS07160 WP_002983379.1 1373698..1374423(-) (pptA) [Streptococcus pyogenes strain NCTC8304]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140832 DQN57_RS07160 WP_002983379.1 1373698..1374423(-) (pptA) [Streptococcus pyogenes strain NCTC8304]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment