Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQN44_RS07745 Genome accession   NZ_LS483414
Coordinates   1489836..1490645 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13736     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1484836..1495645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN44_RS07735 (NCTC13736_01539) smc 1485172..1488711 (-) 3540 WP_030127188.1 chromosome segregation protein SMC -
  DQN44_RS07740 (NCTC13736_01540) rnc 1488712..1489404 (-) 693 WP_002985639.1 ribonuclease III -
  DQN44_RS07745 (NCTC13736_01541) vicX 1489836..1490645 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQN44_RS07750 (NCTC13736_01542) vicK 1490649..1492001 (-) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQN44_RS07755 (NCTC13736_01543) vicR 1491994..1492704 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQN44_RS07760 (NCTC13736_01544) - 1492866..1493900 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQN44_RS07765 (NCTC13736_01545) - 1493956..1495203 (-) 1248 WP_030127187.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1140771 DQN44_RS07745 WP_002985641.1 1489836..1490645(-) (vicX) [Streptococcus pyogenes strain NCTC13736]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1140771 DQN44_RS07745 WP_002985641.1 1489836..1490645(-) (vicX) [Streptococcus pyogenes strain NCTC13736]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment