Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN44_RS02220 Genome accession   NZ_LS483414
Coordinates   422096..422821 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13736     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 417096..427821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN44_RS02190 (NCTC13736_00430) - 417276..418736 (+) 1461 WP_002988645.1 NCS2 family permease -
  DQN44_RS02195 (NCTC13736_00431) tsaE 418890..419351 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN44_RS02200 (NCTC13736_00432) - 419326..419850 (+) 525 WP_002988650.1 GNAT family N-acetyltransferase -
  DQN44_RS02205 (NCTC13736_00433) brpA 419859..421139 (+) 1281 WP_002988654.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN44_RS02210 (NCTC13736_00434) - 421252..421608 (-) 357 WP_002988657.1 hypothetical protein -
  DQN44_RS02215 (NCTC13736_00435) - 421605..422024 (-) 420 WP_002988659.1 HIT family protein -
  DQN44_RS02220 (NCTC13736_00436) pptA 422096..422821 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN44_RS02225 (NCTC13736_00437) - 422824..423858 (+) 1035 WP_030127300.1 ABC transporter permease -
  DQN44_RS02230 (NCTC13736_00438) ccrZ 423922..424713 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN44_RS02235 (NCTC13736_00439) trmB 424713..425348 (+) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN44_RS02245 (NCTC13736_00441) rimP 425608..426144 (+) 537 WP_030127299.1 ribosome maturation factor RimP -
  DQN44_RS02250 (NCTC13736_00442) nusA 426319..427476 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQN44_RS02255 (NCTC13736_00443) rnpM 427492..427788 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1140753 DQN44_RS02220 WP_002983379.1 422096..422821(+) (pptA) [Streptococcus pyogenes strain NCTC13736]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140753 DQN44_RS02220 WP_002983379.1 422096..422821(+) (pptA) [Streptococcus pyogenes strain NCTC13736]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment