Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   T303_RS01090 Genome accession   NZ_CP006819
Coordinates   189138..189905 (+) Length   255 a.a.
NCBI ID   WP_011681768.1    Uniprot ID   A0A0E2PYL2
Organism   Streptococcus thermophilus ASCC 1275     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 184138..194905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  T303_RS11865 (T303_01075) - 186455..187137 (-) 683 Protein_199 YoaK family protein -
  T303_RS01080 (T303_01080) rlmH 187153..187632 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  T303_RS01085 (T303_01085) htrA 187837..189072 (+) 1236 WP_014727759.1 trypsin-like peptidase domain-containing protein Regulator
  T303_RS01090 (T303_01090) spo0J 189138..189905 (+) 768 WP_011681768.1 ParB/RepB/Spo0J family partition protein Regulator
  T303_RS01095 (T303_01095) dnaA 190144..191508 (+) 1365 WP_038694490.1 chromosomal replication initiator protein DnaA -
  T303_RS01100 (T303_01100) dnaN 191663..192799 (+) 1137 WP_024704280.1 DNA polymerase III subunit beta -
  T303_RS01105 (T303_01105) - 192850..193041 (+) 192 WP_002886272.1 DUF951 domain-containing protein -
  T303_RS01110 (T303_01110) ychF 193254..194369 (+) 1116 WP_014727272.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.80 Da        Isoelectric Point: 9.4740

>NTDB_id=114068 T303_RS01090 WP_011681768.1 189138..189905(+) (spo0J) [Streptococcus thermophilus ASCC 1275]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=114068 T303_RS01090 WP_011681768.1 189138..189905(+) (spo0J) [Streptococcus thermophilus ASCC 1275]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2PYL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment