Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | DQN67_RS03280 | Genome accession | NZ_LS483410 |
| Coordinates | 678604..679311 (-) | Length | 235 a.a. |
| NCBI ID | WP_027224586.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain NCTC11404 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 673604..684311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN67_RS03265 (NCTC11404_00635) | - | 676479..676991 (-) | 513 | WP_027224583.1 | pilus assembly protein | - |
| DQN67_RS03270 (NCTC11404_00636) | - | 676988..678055 (-) | 1068 | WP_027224584.1 | PilW family protein | - |
| DQN67_RS03275 (NCTC11404_00637) | pilV | 678052..678591 (-) | 540 | WP_027224585.1 | type IV pilus modification protein PilV | - |
| DQN67_RS03280 (NCTC11404_00638) | fimT | 678604..679311 (-) | 708 | WP_027224586.1 | GspH/FimT family pseudopilin | Machinery gene |
| DQN67_RS03285 (NCTC11404_00639) | - | 679541..680401 (-) | 861 | WP_027224587.1 | polysaccharide deacetylase family protein | - |
| DQN67_RS03290 (NCTC11404_00640) | - | 680578..681927 (-) | 1350 | WP_080031323.1 | lpg0634 family Dot/Icm T4SS effector | - |
| DQN67_RS03295 (NCTC11404_00641) | - | 682215..683696 (+) | 1482 | WP_027224588.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 25032.68 Da Isoelectric Point: 7.5939
>NTDB_id=1140603 DQN67_RS03280 WP_027224586.1 678604..679311(-) (fimT) [Legionella pneumophila strain NCTC11404]
MNKVITESQKFTLHNIANMLFCVERSVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWNSGWIVVTQPVAGTPTL
LKTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGSTPGQAVWNNGALNCP
MNKVITESQKFTLHNIANMLFCVERSVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWNSGWIVVTQPVAGTPTL
LKTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGSTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1140603 DQN67_RS03280 WP_027224586.1 678604..679311(-) (fimT) [Legionella pneumophila strain NCTC11404]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCACAACATAGCAAATATGTTATTTTGCGTGGAGAGAAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGATAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTTTAATTGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATAGGGCAGTCAATGTAGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAACTCAGGATGGATAGTGGTGACTCAACCAGTAGCAGGAACCCCAACGCTT
TTAAAAACGCATCAAACTTCTGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCATTTGCCCGCTCGGCAATGGTTTTGGCCACCG
GATTTGTCCAATCCGGATCAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCACAACATAGCAAATATGTTATTTTGCGTGGAGAGAAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGATAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTTTAATTGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATAGGGCAGTCAATGTAGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAACTCAGGATGGATAGTGGTGACTCAACCAGTAGCAGGAACCCCAACGCTT
TTAAAAACGCATCAAACTTCTGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCATTTGCCCGCTCGGCAATGGTTTTGGCCACCG
GATTTGTCCAATCCGGATCAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.17 |
100 |
0.962 |