Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQN21_RS02415 Genome accession   NZ_LS483409
Coordinates   426873..427598 (+) Length   241 a.a.
NCBI ID   WP_009853437.1    Uniprot ID   A0A060RHE2
Organism   Streptococcus gallolyticus strain NCTC13773     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 421873..432598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN21_RS02385 (NCTC13773_00468) - 422203..423624 (+) 1422 WP_009853431.1 NCS2 family permease -
  DQN21_RS02390 (NCTC13773_00469) tsaE 423809..424252 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN21_RS02395 (NCTC13773_00470) - 424245..424757 (+) 513 Protein_404 N-acetyltransferase family protein -
  DQN21_RS02400 (NCTC13773_00471) brpA 424768..425925 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN21_RS02405 (NCTC13773_00472) - 426091..426393 (-) 303 WP_077496226.1 hypothetical protein -
  DQN21_RS02410 (NCTC13773_00473) - 426390..426809 (-) 420 WP_061459029.1 HIT family protein -
  DQN21_RS02415 (NCTC13773_00474) pptA 426873..427598 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  DQN21_RS02420 (NCTC13773_00475) - 427600..428634 (+) 1035 WP_077496228.1 ABC transporter permease -
  DQN21_RS02425 (NCTC13773_00476) ccrZ 428699..429493 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  DQN21_RS02430 (NCTC13773_00477) trmB 429493..430131 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN21_RS02440 (NCTC13773_00480) - 430474..431499 (+) 1026 WP_077496230.1 sensor domain-containing diguanylate cyclase -
  DQN21_RS02445 (NCTC13773_00481) - 431505..432572 (+) 1068 WP_077496232.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26751.00 Da        Isoelectric Point: 4.3757

>NTDB_id=1140549 DQN21_RS02415 WP_009853437.1 426873..427598(+) (pptA) [Streptococcus gallolyticus strain NCTC13773]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140549 DQN21_RS02415 WP_009853437.1 426873..427598(+) (pptA) [Streptococcus gallolyticus strain NCTC13773]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTCAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCGGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTAGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060RHE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

80.335

99.17

0.797
  pptA Streptococcus thermophilus LMD-9

79.916

99.17

0.793

Multiple sequence alignment