Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQM86_RS06845 Genome accession   NZ_LS483407
Coordinates   1337853..1338578 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13744     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1332853..1343578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM86_RS06810 (NCTC13744_01354) rnpM 1332887..1333183 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQM86_RS06815 (NCTC13744_01355) nusA 1333199..1334356 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  DQM86_RS06820 (NCTC13744_01356) rimP 1334531..1335067 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQM86_RS06830 (NCTC13744_01358) trmB 1335326..1335961 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM86_RS06835 (NCTC13744_01359) ccrZ 1335961..1336752 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM86_RS06840 (NCTC13744_01360) - 1336816..1337850 (-) 1035 WP_002994331.1 ABC transporter permease -
  DQM86_RS06845 (NCTC13744_01361) pptA 1337853..1338578 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQM86_RS06850 (NCTC13744_01362) - 1338650..1339069 (+) 420 WP_002983376.1 HIT family protein -
  DQM86_RS06855 (NCTC13744_01363) - 1339066..1339422 (+) 357 WP_047235695.1 hypothetical protein -
  DQM86_RS06860 (NCTC13744_01364) brpA 1339533..1340816 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM86_RS06865 (NCTC13744_01365) - 1340825..1341349 (-) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  DQM86_RS06870 (NCTC13744_01366) tsaE 1341324..1341785 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM86_RS06875 (NCTC13744_01367) - 1341939..1343399 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1140469 DQM86_RS06845 WP_002983379.1 1337853..1338578(-) (pptA) [Streptococcus pyogenes strain NCTC13744]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140469 DQM86_RS06845 WP_002983379.1 1337853..1338578(-) (pptA) [Streptococcus pyogenes strain NCTC13744]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment