Detailed information NTG1140442

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM86_RS01430
• Genome accession: NZ_LS483407
• Coordinates: 262072..262995 (+)
• Length: 307 a.a.
• NCBI ID: WP_109828742.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC13744
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 257072..267995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM86_RS01415 (NCTC13744_00282)	amiC	258572..260074 (+)	1503	WP_002992227.1	ABC transporter permease	Regulator
DQM86_RS01420 (NCTC13744_00283)	amiD	260074..261000 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQM86_RS01425 (NCTC13744_00284)	amiE	261009..262079 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
DQM86_RS01430 (NCTC13744_00285)	amiF	262072..262995 (+)	924	WP_109828742.1	ABC transporter ATP-binding protein	Regulator
DQM86_RS09555	-	263033..263116 (-)	84	Protein_231	IS3 family transposase	-
DQM86_RS09320	-	263143..263394 (-)	252	WP_194088246.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34643.84 Da
• Isoelectric Point: 6.7095

>NTDB_id=1140442 DQM86_RS01430 WP_109828742.1 262072..262995(+) (amiF) [Streptococcus pyogenes strain NCTC13744]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAGKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1140442 DQM86_RS01430 WP_109828742.1 262072..262995(+) (amiF) [Streptococcus pyogenes strain NCTC13744]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGGAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814