Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DQN23_RS08385 | Genome accession | NZ_LS483403 |
| Coordinates | 1672389..1674830 (-) | Length | 813 a.a. |
| NCBI ID | WP_111713028.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC13774 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1667389..1679830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN23_RS08365 (NCTC13774_01750) | - | 1668242..1669060 (+) | 819 | WP_020917563.1 | hypothetical protein | - |
| DQN23_RS08370 (NCTC13774_01751) | - | 1669079..1670353 (+) | 1275 | WP_111713027.1 | toxic anion resistance protein | - |
| DQN23_RS08375 (NCTC13774_01752) | hslO | 1670467..1671333 (+) | 867 | WP_043895138.1 | Hsp33 family molecular chaperone HslO | - |
| DQN23_RS08380 (NCTC13774_01753) | dusB | 1671326..1672303 (+) | 978 | WP_020917566.1 | tRNA dihydrouridine synthase DusB | - |
| DQN23_RS08385 (NCTC13774_01754) | clpC | 1672389..1674830 (-) | 2442 | WP_111713028.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQN23_RS08390 (NCTC13774_01755) | - | 1674827..1675288 (-) | 462 | WP_039696152.1 | CtsR family transcriptional regulator | - |
| DQN23_RS08395 (NCTC13774_01756) | - | 1675546..1676010 (+) | 465 | WP_020917569.1 | small multi-drug export protein | - |
| DQN23_RS08400 (NCTC13774_01757) | tsf | 1676110..1677147 (-) | 1038 | WP_020917570.1 | translation elongation factor Ts | - |
| DQN23_RS08405 (NCTC13774_01758) | rpsB | 1677256..1678023 (-) | 768 | WP_043895139.1 | 30S ribosomal protein S2 | - |
| DQN23_RS08415 (NCTC13774_01760) | - | 1678544..1679497 (+) | 954 | WP_111713029.1 | S66 peptidase family protein | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90135.62 Da Isoelectric Point: 6.2743
>NTDB_id=1140369 DQN23_RS08385 WP_111713028.1 1672389..1674830(-) (clpC) [Streptococcus lutetiensis strain NCTC13774]
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLAFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKRSYETFHNVMISDD
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKETPSDLTPADQAILEGDFKKATKLLKALRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGNLASGNTLK
IGVSKGQLKFDIA
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLAFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKRSYETFHNVMISDD
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKETPSDLTPADQAILEGDFKKATKLLKALRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGNLASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=1140369 DQN23_RS08385 WP_111713028.1 1672389..1674830(-) (clpC) [Streptococcus lutetiensis strain NCTC13774]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCGGCTGTTTTGGCGCTCGGAAAATCACCTTTGGCAGATGTGAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAGCTTTTGCTGAATCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAGCCTAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCC
GGTGTCGGAAAAACGGCTCTTGCTTATGGTTTGGCACAACGTATTGTCGATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGACTTTGAGGAGCGCATGAACCAAA
TCATCTCAGATATCGAAGAAGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAACATCTTAAAACCAGCTCTTGCGCGCGGTACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAGATTTTACTTGGACTTAAAAGATCTTACGAAACTTTCCACAATGTAATGATTTCTGATGAT
GCTGTGTTGACAGCAGTTAAAGCTGCCCACCGTTATTTGACAAGTAAGAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAACACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATTACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATCATGGCAACTCTTAGCCGTTTGTCAGGTATTCCTGTTGAAAAAATGACGCAAGCTGACAGTAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTGTTATTGGTCAAGATGCTGCAATTTCTGCCATTAGCCGTGCTATTCGTCGAA
ATCAAGCTGGTATCCGTACAGGAAAACGTCCAATTGGTTCATTTATGTTCTTAGGACCAACAGGTGTTGGTAAGACAGAA
TTAGCTAAGGCTTTAGCAGAGCTACTTTTTGATGATGAATCAGCACTTATCCGCTTTGATATGTCTGAATACATGGAAAA
ATTTGCAGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAAGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAATGTCTTACTTCAAGTC
TTGGATGATGGCGTGTTGACAGATAGTCGTGGTCGTAAAGTTGACTTCTCAAATACTATTATTATCATGACGTCAAACCT
TGGTGCAACTGCCCTTCGTGATGATAAGACAGTTGGATTTGGGGCGCGTGACATGGCTCATGATTATGATGCTATGCAAA
AACGCATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAC
CTAACACAAGAAAATATGCGTGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACATTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTAATTTGGCAAGTGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGACAACTCAAATTTGATATTGCATAA
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCGGCTGTTTTGGCGCTCGGAAAATCACCTTTGGCAGATGTGAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAGCTTTTGCTGAATCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAGCCTAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCC
GGTGTCGGAAAAACGGCTCTTGCTTATGGTTTGGCACAACGTATTGTCGATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGACTTTGAGGAGCGCATGAACCAAA
TCATCTCAGATATCGAAGAAGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAACATCTTAAAACCAGCTCTTGCGCGCGGTACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAGATTTTACTTGGACTTAAAAGATCTTACGAAACTTTCCACAATGTAATGATTTCTGATGAT
GCTGTGTTGACAGCAGTTAAAGCTGCCCACCGTTATTTGACAAGTAAGAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAACACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATTACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATCATGGCAACTCTTAGCCGTTTGTCAGGTATTCCTGTTGAAAAAATGACGCAAGCTGACAGTAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTGTTATTGGTCAAGATGCTGCAATTTCTGCCATTAGCCGTGCTATTCGTCGAA
ATCAAGCTGGTATCCGTACAGGAAAACGTCCAATTGGTTCATTTATGTTCTTAGGACCAACAGGTGTTGGTAAGACAGAA
TTAGCTAAGGCTTTAGCAGAGCTACTTTTTGATGATGAATCAGCACTTATCCGCTTTGATATGTCTGAATACATGGAAAA
ATTTGCAGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAAGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAATGTCTTACTTCAAGTC
TTGGATGATGGCGTGTTGACAGATAGTCGTGGTCGTAAAGTTGACTTCTCAAATACTATTATTATCATGACGTCAAACCT
TGGTGCAACTGCCCTTCGTGATGATAAGACAGTTGGATTTGGGGCGCGTGACATGGCTCATGATTATGATGCTATGCAAA
AACGCATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAC
CTAACACAAGAAAATATGCGTGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACATTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTAATTTGGCAAGTGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGACAACTCAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.217 |
99.877 |
0.771 |
| clpC | Streptococcus thermophilus LMG 18311 |
74.233 |
100 |
0.744 |
| clpC | Streptococcus thermophilus LMD-9 |
74.233 |
100 |
0.744 |
| clpC | Streptococcus pneumoniae Rx1 |
67.857 |
99.877 |
0.678 |
| clpC | Streptococcus pneumoniae D39 |
67.857 |
99.877 |
0.678 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.857 |
99.877 |
0.678 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.34 |
100 |
0.506 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.043 |
100 |
0.45 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae Rx1 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae D39 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae R6 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus mutans UA159 |
47.496 |
76.138 |
0.362 |