Detailed information NTG1140334

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DQN23_RS01640
• Genome accession: NZ_LS483403
• Coordinates: 293086..294132 (+)
• Length: 348 a.a.
• NCBI ID: WP_111712624.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC13774
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 288086..299132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN23_RS01625 (NCTC13774_00328)	-	289349..291004 (+)	1656	WP_111712622.1	peptide ABC transporter substrate-binding protein	-
DQN23_RS01630 (NCTC13774_00329)	-	291117..292031 (+)	915	WP_020916177.1	ABC transporter permease	-
DQN23_RS01635 (NCTC13774_00330)	-	292043..293074 (+)	1032	WP_111712623.1	ABC transporter permease	-
DQN23_RS01640 (NCTC13774_00331)	oppD	293086..294132 (+)	1047	WP_111712624.1	ABC transporter ATP-binding protein	Regulator
DQN23_RS01645 (NCTC13774_00332)	amiF	294132..295064 (+)	933	WP_061409237.1	ABC transporter ATP-binding protein	Regulator
DQN23_RS01650 (NCTC13774_00333)	-	295230..296183 (-)	954	WP_111712625.1	IS30 family transposase	-
DQN23_RS01655 (NCTC13774_00334)	-	296424..296837 (+)	414	WP_058833241.1	PTS sugar transporter subunit IIA	-
DQN23_RS01660 (NCTC13774_00335)	-	296853..297320 (+)	468	WP_058833240.1	PTS sugar transporter subunit IIB	-
DQN23_RS01665 (NCTC13774_00336)	-	297331..298107 (+)	777	WP_111712626.1	PTS sugar transporter subunit IIC	-
DQN23_RS01670 (NCTC13774_00337)	-	298094..298912 (+)	819	WP_111713070.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38654.27 Da
• Isoelectric Point: 5.0392

>NTDB_id=1140334 DQN23_RS01640 WP_111712624.1 293086..294132(+) (oppD) [Streptococcus lutetiensis strain NCTC13774]
MSEETILQVKNLHVDFQTYAGEIKAIRDVNFDLKKGETLAIVGESGSGKSVTTKTLMGLSASNATITGDIDFKGKKLTEL
KEDEWIKVRGNEIAMIFQDPMTSLDPTMKIGQQIAEPIMIHKKVSKQEAWDRALDLMKNVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPDVLIADEPTTALDVTIQAQILNLMKKIQKERGSSIIFITHDLGVVAGMADRVAVMYAGKVIEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEAGSLQSIPGTPPDLLNPPKGDAFAPRNEFALDIDYEEEPPMFKVSDTHYAATWLL
DERAPKVTPPLPIQKRWAKWKELEGRKA

Nucleotide

• Length: 1047 bp

>NTDB_id=1140334 DQN23_RS01640 WP_111712624.1 293086..294132(+) (oppD) [Streptococcus lutetiensis strain NCTC13774]
ATGAGTGAAGAAACAATTTTACAAGTTAAAAACCTCCATGTAGATTTCCAAACCTACGCTGGAGAAATAAAAGCCATTCG
CGACGTCAACTTTGACTTGAAGAAAGGCGAAACACTTGCTATCGTAGGTGAATCTGGATCAGGTAAATCTGTAACAACTA
AAACATTAATGGGGTTATCTGCTTCAAATGCTACTATTACAGGTGACATTGACTTTAAAGGTAAAAAACTTACTGAATTA
AAAGAAGACGAATGGATTAAAGTTCGTGGAAATGAAATCGCAATGATTTTCCAAGATCCAATGACGAGTCTTGATCCAAC
AATGAAAATTGGTCAACAAATTGCCGAACCAATCATGATCCACAAAAAAGTTTCAAAACAAGAAGCTTGGGATCGTGCAC
TTGATTTAATGAAGAACGTTGGTATTCCAAATGCAGAAGAACATATCAACGATTACCCACACCAATGGTCTGGTGGTATG
CGTCAACGTGCTGTTATTGCAATCGCGCTTGCTGCTAACCCGGATGTCTTGATTGCTGACGAACCAACAACTGCCTTGGA
TGTTACTATTCAAGCTCAAATTCTTAACTTGATGAAAAAAATTCAAAAAGAACGAGGTTCATCAATCATCTTTATCACCC
ACGACCTTGGTGTTGTTGCTGGTATGGCTGATCGTGTAGCAGTTATGTATGCTGGTAAAGTTATTGAATATGGAACAGTT
GACGAAGTCTTCTACAACCCACAACACCCATATACTTGGGGGTTGTTGAACTCAATGCCAACAACTGATACAGAAGCTGG
TAGCTTACAATCAATTCCAGGTACACCACCAGATCTTCTTAACCCGCCAAAAGGTGATGCTTTTGCACCACGTAACGAAT
TTGCTTTGGATATCGATTACGAAGAAGAACCACCAATGTTTAAAGTTAGTGACACACACTATGCTGCAACTTGGTTGTTA
GACGAACGTGCACCTAAAGTAACACCACCATTACCAATTCAAAAACGTTGGGCAAAATGGAAAGAACTTGAAGGGAGAAA
AGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.115	99.713	0.799
amiE	Streptococcus salivarius strain HSISS4	57.31	98.276	0.563
amiE	Streptococcus thermophilus LMG 18311	57.91	96.264	0.557
amiE	Streptococcus thermophilus LMD-9	57.91	96.264	0.557