Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DQM79_RS09075 Genome accession   NZ_LS483401
Coordinates   1794264..1795040 (+) Length   258 a.a.
NCBI ID   WP_032461591.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10085     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1789264..1800040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM79_RS09055 (NCTC10085_01780) - 1791091..1791865 (-) 775 Protein_1680 IS30 family transposase -
  DQM79_RS09065 (NCTC10085_01783) rlmH 1792261..1792740 (-) 480 WP_002991465.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM79_RS09070 (NCTC10085_01784) htrA 1792952..1794175 (+) 1224 WP_002991468.1 S1C family serine protease Regulator
  DQM79_RS09075 (NCTC10085_01785) spo0J 1794264..1795040 (+) 777 WP_032461591.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29072.87 Da        Isoelectric Point: 10.3100

>NTDB_id=1140313 DQM79_RS09075 WP_032461591.1 1794264..1795040(+) (spo0J) [Streptococcus pyogenes strain NCTC10085]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1140313 DQM79_RS09075 WP_032461591.1 1794264..1795040(+) (spo0J) [Streptococcus pyogenes strain NCTC10085]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAACACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAACAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581

Multiple sequence alignment