Detailed information NTG1140193

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DQO07_RS04650
• Genome accession: NZ_LS483398
• Coordinates: 930270..931373 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NCTC10910
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 925270..936373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQO07_RS04620 (NCTC10910_00918)	-	925307..926257 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
DQO07_RS04625 (NCTC10910_00919)	-	926251..926736 (+)	486	Protein_901	phosphonate ABC transporter ATP-binding protein	-
DQO07_RS04630 (NCTC10910_00920)	phnE	926754..927623 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
DQO07_RS04635 (NCTC10910_00921)	phnE	927620..928441 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
DQO07_RS04645 (NCTC10910_00923)	-	928625..930223 (+)	1599	Protein_904	CYTH and CHAD domain-containing protein	-
DQO07_RS04650 (NCTC10910_00924)	pilA	930270..931373 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
DQO07_RS04655 (NCTC10910_00925)	rsmD	931449..932069 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DQO07_RS04660 (NCTC10910_00926)	coaD	932090..932599 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
DQO07_RS04665 (NCTC10910_00927)	-	932654..932905 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
DQO07_RS04670 (NCTC10910_00928)	-	932969..934102 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
DQO07_RS04675 (NCTC10910_00929)	-	934110..934496 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=1140193 DQO07_RS04650 WP_023853086.1 930270..931373(-) (pilA) [Bordetella pertussis strain NCTC10910]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=1140193 DQO07_RS04650 WP_023853086.1 930270..931373(-) (pilA) [Bordetella pertussis strain NCTC10910]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507