Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQM37_RS06075 Genome accession   NZ_LS483394
Coordinates   1190717..1191754 (-) Length   345 a.a.
NCBI ID   WP_111694896.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10880     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1185717..1196754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM37_RS06050 (NCTC10880_01215) - 1185720..1186247 (-) 528 WP_002983837.1 Dps family protein -
  DQM37_RS06055 (NCTC10880_01216) - 1186475..1187101 (+) 627 WP_002989076.1 prepilin peptidase -
  DQM37_RS06060 (NCTC10880_01218) rlmN 1187183..1188243 (-) 1061 Protein_1127 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQM37_RS06065 (NCTC10880_01219) - 1188247..1188867 (-) 621 WP_002992791.1 YutD family protein -
  DQM37_RS06070 (NCTC10880_01221) - 1189326..1190303 (-) 978 WP_023611793.1 LacI family DNA-binding transcriptional regulator -
  DQM37_RS06075 (NCTC10880_01222) sepM 1190717..1191754 (-) 1038 WP_111694896.1 SepM family pheromone-processing serine protease Regulator
  DQM37_RS06080 (NCTC10880_01223) coaD 1191741..1192232 (-) 492 WP_111694897.1 pantetheine-phosphate adenylyltransferase -
  DQM37_RS06085 (NCTC10880_01224) rsmD 1192222..1192761 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQM37_RS06090 (NCTC10880_01225) asnA 1192884..1193876 (-) 993 WP_023611792.1 aspartate--ammonia ligase -
  DQM37_RS06095 (NCTC10880_01226) arcC 1194189..1195139 (-) 951 WP_015057899.1 carbamate kinase -
  DQM37_RS06100 (NCTC10880_01227) - 1195159..1196490 (-) 1332 WP_032460502.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37540.30 Da        Isoelectric Point: 9.8226

>NTDB_id=1140103 DQM37_RS06075 WP_111694896.1 1190717..1191754(-) (sepM) [Streptococcus pyogenes strain NCTC10880]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDKVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1140103 DQM37_RS06075 WP_111694896.1 1190717..1191754(-) (sepM) [Streptococcus pyogenes strain NCTC10880]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGCTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATAAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACTAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.565

100

0.696


Multiple sequence alignment