Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DQN61_RS09745 Genome accession   NZ_LS483391
Coordinates   1862062..1862838 (+) Length   258 a.a.
NCBI ID   WP_023079621.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8320     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1857062..1867838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN61_RS09725 (NCTC8320_01934) - 1858890..1859664 (-) 775 Protein_1822 IS30 family transposase -
  DQN61_RS09735 (NCTC8320_01937) rlmH 1860059..1860538 (-) 480 WP_011018348.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQN61_RS09740 (NCTC8320_01938) htrA 1860750..1861973 (+) 1224 WP_002981947.1 S1C family serine protease Regulator
  DQN61_RS09745 (NCTC8320_01939) spo0J 1862062..1862838 (+) 777 WP_023079621.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29058.85 Da        Isoelectric Point: 10.3100

>NTDB_id=1140012 DQN61_RS09745 WP_023079621.1 1862062..1862838(+) (spo0J) [Streptococcus pyogenes strain NCTC8320]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKSIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1140012 DQN61_RS09745 WP_023079621.1 1862062..1862838(+) (spo0J) [Streptococcus pyogenes strain NCTC8320]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAATCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581

Multiple sequence alignment