Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQN61_RS07490 Genome accession   NZ_LS483391
Coordinates   1412512..1413237 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8320     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1407512..1418237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN61_RS07455 (NCTC8320_01492) rnpM 1407546..1407842 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQN61_RS07460 (NCTC8320_01493) nusA 1407858..1409015 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  DQN61_RS07465 (NCTC8320_01494) rimP 1409190..1409726 (-) 537 WP_002983483.1 ribosome maturation factor RimP -
  DQN61_RS07475 (NCTC8320_01496) trmB 1409985..1410620 (-) 636 WP_011018101.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQN61_RS07480 (NCTC8320_01497) ccrZ 1410620..1411411 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQN61_RS07485 (NCTC8320_01498) - 1411475..1412509 (-) 1035 WP_002983381.1 ABC transporter permease -
  DQN61_RS07490 (NCTC8320_01499) pptA 1412512..1413237 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQN61_RS07495 (NCTC8320_01500) - 1413309..1413728 (+) 420 WP_002983376.1 HIT family protein -
  DQN61_RS07500 (NCTC8320_01501) - 1413725..1414081 (+) 357 WP_011018102.1 hypothetical protein -
  DQN61_RS07505 (NCTC8320_01502) brpA 1414192..1415475 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQN61_RS07510 (NCTC8320_01503) - 1415484..1416008 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  DQN61_RS07515 (NCTC8320_01504) tsaE 1415983..1416444 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQN61_RS07520 (NCTC8320_01505) - 1416598..1418058 (-) 1461 WP_011018103.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1140000 DQN61_RS07490 WP_002983379.1 1412512..1413237(-) (pptA) [Streptococcus pyogenes strain NCTC8320]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1140000 DQN61_RS07490 WP_002983379.1 1412512..1413237(-) (pptA) [Streptococcus pyogenes strain NCTC8320]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment