Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQM81_RS09295 Genome accession   NZ_LS483389
Coordinates   1811396..1812109 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC10879     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1806396..1817109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM81_RS09285 (NCTC10879_01853) treC 1807466..1809094 (-) 1629 WP_111688367.1 alpha,alpha-phosphotrehalase -
  DQM81_RS09290 (NCTC10879_01854) treP 1809161..1811185 (-) 2025 WP_111688368.1 PTS system trehalose-specific EIIBC component -
  DQM81_RS09295 (NCTC10879_01855) treR 1811396..1812109 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  DQM81_RS09305 (NCTC10879_01856) - 1812355..1812725 (-) 371 Protein_1746 winged helix-turn-helix transcriptional regulator -
  DQM81_RS09310 (NCTC10879_01857) - 1812912..1813769 (+) 858 WP_111688369.1 VOC family protein -
  DQM81_RS09315 (NCTC10879_01858) yaaA 1813811..1814542 (+) 732 WP_111688370.1 peroxide stress protein YaaA -
  DQM81_RS09320 (NCTC10879_01859) nrdG 1814716..1815330 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQM81_RS09325 (NCTC10879_01860) - 1815330..1815839 (-) 510 WP_111688371.1 GNAT family N-acetyltransferase -
  DQM81_RS09330 (NCTC10879_01861) - 1815848..1816783 (-) 936 WP_038434333.1 Gfo/Idh/MocA family protein -
  DQM81_RS09915 (NCTC10879_01862) - 1816812..1816958 (-) 147 WP_023610752.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1139874 DQM81_RS09295 WP_002982243.1 1811396..1812109(+) (treR) [Streptococcus pyogenes strain NCTC10879]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1139874 DQM81_RS09295 WP_002982243.1 1811396..1812109(+) (treR) [Streptococcus pyogenes strain NCTC10879]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCCTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment