Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | DQM45_RS02950 | Genome accession | NZ_LS483388 |
| Coordinates | 583613..585415 (+) | Length | 600 a.a. |
| NCBI ID | WP_003082959.1 | Uniprot ID | - |
| Organism | Streptococcus porcinus strain NCTC10999 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 578613..590415
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM45_RS02925 (NCTC10999_00595) | queA | 578646..579674 (-) | 1029 | WP_003083635.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| DQM45_RS02930 (NCTC10999_00596) | nagB | 579848..580558 (+) | 711 | WP_003085267.1 | glucosamine-6-phosphate deaminase | - |
| DQM45_RS02935 (NCTC10999_00597) | - | 580629..581345 (+) | 717 | WP_003083305.1 | pseudouridine synthase | - |
| DQM45_RS02940 (NCTC10999_00598) | - | 581439..582584 (+) | 1146 | WP_003084884.1 | MFS transporter | - |
| DQM45_RS02945 (NCTC10999_00599) | - | 582653..583603 (+) | 951 | WP_003084896.1 | competence protein CoiA | - |
| DQM45_RS02950 (NCTC10999_00600) | pepF | 583613..585415 (+) | 1803 | WP_003082959.1 | oligoendopeptidase F | Regulator |
| DQM45_RS02955 (NCTC10999_00601) | - | 585492..586133 (+) | 642 | WP_003084531.1 | HAD family phosphatase | - |
| DQM45_RS02960 (NCTC10999_00602) | - | 586293..587000 (+) | 708 | WP_172601666.1 | O-methyltransferase | - |
| DQM45_RS02965 (NCTC10999_00603) | prsA | 587063..588004 (+) | 942 | WP_003084321.1 | peptidylprolyl isomerase PrsA | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 69842.01 Da Isoelectric Point: 4.8029
>NTDB_id=1139791 DQM45_RS02950 WP_003082959.1 583613..585415(+) (pepF) [Streptococcus porcinus strain NCTC10999]
MADNRSHLEEKYTWDLTTIFDSDQRWETEVNALKIDLEKAQTLAGHLLDSAKELLEITEIQLDLSRRIEKVYVYAHMKND
QDTTVAKYQEYQSKASALYAKFSEVFSFYEPEFMTILPNQFDEFLKEEPKLEDYHHFFEKLLKNKEHVLSQAEEELLAGA
QEIFNGAEETFGLLDNADIQFPIIKDEKGQDVEITHGNFIHLMESKDRQVRQAAYEALYSTYEQFQHTYAKTLQTNVKVN
NYKARVHHYASARQAAMTANFIPETVYDTLLEVVNRKLPLLHRYLELRKKILGLKSLKMYDVYTPLSQTDLSVNYDQALE
KAEKVLSVFGKEYSDYVHQAFSERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDNLDNLYTLVHETGHSLHSTLTRKN
QPYVYGDYSIFLAEIASTTNENILTEALLKDVTDEKERFAILNNYLDGFRGTIFRQSQFAEFEHAIYQADQNGDVLTSDY
LNHLYAQLNEKYYGLAKEDNYYIQYEWARIPHFYYNYYVYQYATGFAAASYLANKIVHGQQKDVDNYLSYLKAGNSDYPL
NVIAKAGVDMTSEAYLEDAFAIFEERLTELEDLVDKGVHL
MADNRSHLEEKYTWDLTTIFDSDQRWETEVNALKIDLEKAQTLAGHLLDSAKELLEITEIQLDLSRRIEKVYVYAHMKND
QDTTVAKYQEYQSKASALYAKFSEVFSFYEPEFMTILPNQFDEFLKEEPKLEDYHHFFEKLLKNKEHVLSQAEEELLAGA
QEIFNGAEETFGLLDNADIQFPIIKDEKGQDVEITHGNFIHLMESKDRQVRQAAYEALYSTYEQFQHTYAKTLQTNVKVN
NYKARVHHYASARQAAMTANFIPETVYDTLLEVVNRKLPLLHRYLELRKKILGLKSLKMYDVYTPLSQTDLSVNYDQALE
KAEKVLSVFGKEYSDYVHQAFSERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDNLDNLYTLVHETGHSLHSTLTRKN
QPYVYGDYSIFLAEIASTTNENILTEALLKDVTDEKERFAILNNYLDGFRGTIFRQSQFAEFEHAIYQADQNGDVLTSDY
LNHLYAQLNEKYYGLAKEDNYYIQYEWARIPHFYYNYYVYQYATGFAAASYLANKIVHGQQKDVDNYLSYLKAGNSDYPL
NVIAKAGVDMTSEAYLEDAFAIFEERLTELEDLVDKGVHL
Nucleotide
Download Length: 1803 bp
>NTDB_id=1139791 DQM45_RS02950 WP_003082959.1 583613..585415(+) (pepF) [Streptococcus porcinus strain NCTC10999]
ATGGCAGATAATAGAAGTCATTTAGAAGAAAAGTATACATGGGACTTGACTACTATCTTTGACAGTGATCAAAGATGGGA
AACGGAAGTTAATGCCTTAAAAATAGACTTAGAAAAGGCCCAGACTTTAGCTGGACACCTTTTAGACTCAGCAAAAGAAT
TATTGGAAATAACGGAAATCCAATTGGATTTGTCAAGACGTATTGAAAAGGTCTATGTCTACGCTCACATGAAAAATGAC
CAAGATACGACAGTTGCAAAATACCAGGAATATCAATCAAAAGCATCAGCTTTATATGCGAAATTTAGTGAAGTTTTTTC
GTTTTATGAGCCAGAATTCATGACAATTCTTCCGAACCAATTTGATGAATTTCTTAAGGAAGAACCTAAATTGGAAGACT
ATCATCACTTCTTTGAAAAGCTTCTTAAAAATAAAGAACATGTCCTTAGTCAAGCTGAGGAAGAACTTCTAGCAGGGGCT
CAAGAAATTTTTAACGGTGCTGAGGAGACCTTTGGCCTTTTAGATAATGCTGATATCCAATTTCCAATTATCAAAGATGA
AAAAGGACAAGATGTTGAAATTACTCATGGTAATTTTATCCACTTGATGGAATCTAAAGATCGTCAGGTTCGTCAAGCTG
CTTATGAAGCCTTATACAGTACCTATGAACAATTTCAACATACTTATGCTAAAACACTCCAAACCAATGTTAAGGTAAAT
AATTATAAGGCGCGTGTGCATCACTATGCATCCGCTCGTCAAGCTGCTATGACCGCAAACTTTATTCCCGAAACAGTTTA
TGATACCCTTTTAGAAGTTGTTAACCGTAAGCTCCCGTTACTGCATCGGTATTTAGAATTGAGAAAAAAGATATTAGGTT
TAAAGAGTTTAAAAATGTATGATGTCTATACACCGCTATCTCAAACCGACCTATCTGTCAATTATGACCAAGCTTTGGAA
AAAGCTGAAAAAGTCTTATCTGTTTTCGGAAAAGAGTATAGTGACTATGTTCACCAAGCCTTTTCGGAAAGATGGATTGA
TGTCCATGTTAATAAAGGAAAAAGATCCGGTGCCTATTCAGGTGGGTCTTACGACACCAATGCTTTTATGCTGTTAAACT
GGCAGGATAATTTAGATAATCTCTATACCTTGGTCCATGAGACAGGCCACAGTTTGCATTCAACTCTAACACGTAAAAAC
CAGCCTTATGTCTATGGGGATTACAGTATTTTCTTGGCAGAGATTGCTTCAACAACGAATGAAAATATCTTAACAGAGGC
TCTATTGAAAGATGTTACAGATGAAAAAGAACGCTTTGCTATTCTAAATAATTACTTGGATGGCTTTAGAGGAACTATTT
TCCGCCAAAGTCAATTTGCTGAATTTGAACATGCTATTTATCAAGCTGACCAAAATGGTGATGTCTTAACAAGTGATTAT
TTAAATCACTTATATGCGCAGTTGAATGAAAAATATTACGGTTTAGCCAAAGAAGATAACTATTATATTCAATATGAGTG
GGCTCGTATTCCTCATTTCTATTACAATTATTATGTTTATCAATATGCTACAGGTTTTGCAGCGGCAAGTTATTTAGCAA
ACAAGATTGTTCATGGTCAACAAAAGGATGTTGATAACTATTTGTCTTATCTAAAAGCTGGTAATTCTGATTATCCCTTG
AATGTTATAGCAAAAGCAGGAGTGGACATGACCAGTGAAGCTTATTTAGAAGATGCCTTTGCTATTTTTGAAGAACGTCT
TACAGAATTAGAGGATCTGGTCGATAAGGGTGTTCATTTATAA
ATGGCAGATAATAGAAGTCATTTAGAAGAAAAGTATACATGGGACTTGACTACTATCTTTGACAGTGATCAAAGATGGGA
AACGGAAGTTAATGCCTTAAAAATAGACTTAGAAAAGGCCCAGACTTTAGCTGGACACCTTTTAGACTCAGCAAAAGAAT
TATTGGAAATAACGGAAATCCAATTGGATTTGTCAAGACGTATTGAAAAGGTCTATGTCTACGCTCACATGAAAAATGAC
CAAGATACGACAGTTGCAAAATACCAGGAATATCAATCAAAAGCATCAGCTTTATATGCGAAATTTAGTGAAGTTTTTTC
GTTTTATGAGCCAGAATTCATGACAATTCTTCCGAACCAATTTGATGAATTTCTTAAGGAAGAACCTAAATTGGAAGACT
ATCATCACTTCTTTGAAAAGCTTCTTAAAAATAAAGAACATGTCCTTAGTCAAGCTGAGGAAGAACTTCTAGCAGGGGCT
CAAGAAATTTTTAACGGTGCTGAGGAGACCTTTGGCCTTTTAGATAATGCTGATATCCAATTTCCAATTATCAAAGATGA
AAAAGGACAAGATGTTGAAATTACTCATGGTAATTTTATCCACTTGATGGAATCTAAAGATCGTCAGGTTCGTCAAGCTG
CTTATGAAGCCTTATACAGTACCTATGAACAATTTCAACATACTTATGCTAAAACACTCCAAACCAATGTTAAGGTAAAT
AATTATAAGGCGCGTGTGCATCACTATGCATCCGCTCGTCAAGCTGCTATGACCGCAAACTTTATTCCCGAAACAGTTTA
TGATACCCTTTTAGAAGTTGTTAACCGTAAGCTCCCGTTACTGCATCGGTATTTAGAATTGAGAAAAAAGATATTAGGTT
TAAAGAGTTTAAAAATGTATGATGTCTATACACCGCTATCTCAAACCGACCTATCTGTCAATTATGACCAAGCTTTGGAA
AAAGCTGAAAAAGTCTTATCTGTTTTCGGAAAAGAGTATAGTGACTATGTTCACCAAGCCTTTTCGGAAAGATGGATTGA
TGTCCATGTTAATAAAGGAAAAAGATCCGGTGCCTATTCAGGTGGGTCTTACGACACCAATGCTTTTATGCTGTTAAACT
GGCAGGATAATTTAGATAATCTCTATACCTTGGTCCATGAGACAGGCCACAGTTTGCATTCAACTCTAACACGTAAAAAC
CAGCCTTATGTCTATGGGGATTACAGTATTTTCTTGGCAGAGATTGCTTCAACAACGAATGAAAATATCTTAACAGAGGC
TCTATTGAAAGATGTTACAGATGAAAAAGAACGCTTTGCTATTCTAAATAATTACTTGGATGGCTTTAGAGGAACTATTT
TCCGCCAAAGTCAATTTGCTGAATTTGAACATGCTATTTATCAAGCTGACCAAAATGGTGATGTCTTAACAAGTGATTAT
TTAAATCACTTATATGCGCAGTTGAATGAAAAATATTACGGTTTAGCCAAAGAAGATAACTATTATATTCAATATGAGTG
GGCTCGTATTCCTCATTTCTATTACAATTATTATGTTTATCAATATGCTACAGGTTTTGCAGCGGCAAGTTATTTAGCAA
ACAAGATTGTTCATGGTCAACAAAAGGATGTTGATAACTATTTGTCTTATCTAAAAGCTGGTAATTCTGATTATCCCTTG
AATGTTATAGCAAAAGCAGGAGTGGACATGACCAGTGAAGCTTATTTAGAAGATGCCTTTGCTATTTTTGAAGAACGTCT
TACAGAATTAGAGGATCTGGTCGATAAGGGTGTTCATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.333 |
100 |
0.703 |