Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | DQM45_RS02720 | Genome accession | NZ_LS483388 |
| Coordinates | 535409..537703 (-) | Length | 764 a.a. |
| NCBI ID | WP_003085648.1 | Uniprot ID | - |
| Organism | Streptococcus porcinus strain NCTC10999 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 530409..542703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM45_RS02700 | - | 530425..531192 (+) | 768 | WP_037598887.1 | DivIVA domain-containing protein | - |
| DQM45_RS02705 (NCTC10999_00551) | ileS | 531452..534253 (+) | 2802 | WP_003085681.1 | isoleucine--tRNA ligase | - |
| DQM45_RS02710 (NCTC10999_00552) | - | 534501..534803 (-) | 303 | WP_003084009.1 | DUF1827 family protein | - |
| DQM45_RS02715 (NCTC10999_00553) | - | 534850..535296 (-) | 447 | WP_003083543.1 | NUDIX domain-containing protein | - |
| DQM45_RS02720 (NCTC10999_00554) | clpE | 535409..537703 (-) | 2295 | WP_003085648.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQM45_RS02725 (NCTC10999_00555) | - | 537981..538211 (+) | 231 | WP_003085121.1 | DUF1797 family protein | - |
| DQM45_RS02730 (NCTC10999_00556) | - | 538428..539282 (+) | 855 | WP_003083178.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| DQM45_RS02735 (NCTC10999_00557) | - | 539279..540118 (+) | 840 | WP_003084720.1 | NAD(P)H-hydrate dehydratase | - |
| DQM45_RS02740 (NCTC10999_00558) | xseA | 540257..541600 (+) | 1344 | WP_003082735.1 | exodeoxyribonuclease VII large subunit | - |
| DQM45_RS02745 (NCTC10999_00559) | - | 541575..541793 (+) | 219 | WP_003084065.1 | exodeoxyribonuclease VII small subunit | - |
| DQM45_RS02750 (NCTC10999_00560) | - | 541793..542662 (+) | 870 | WP_003084108.1 | polyprenyl synthetase family protein | - |
Sequence
Protein
Download Length: 764 a.a. Molecular weight: 84996.16 Da Isoelectric Point: 5.1015
>NTDB_id=1139790 DQM45_RS02720 WP_003085648.1 535409..537703(-) (clpE) [Streptococcus porcinus strain NCTC10999]
MLCQNCKLNEASIHLYANVNGKQRQIDLCQNCYQIMKTDANNSIWGGMRSNPQNQKDSLNPLFDDFFGDLNNFRAFGDLP
NTPPTQSGRQNGSGGAGGGNNHNGQGAISGQNARQPQREPGLLEEFGINVTDIARNGDIDPVIGRDEEIIRVIEILNRRT
KNNPVLIGEPGVGKTAVVEGLAQKIVDGSVPHKLQHKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDE
IHEIVGAGTAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQAKYED
YHHVKYSQDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFIDPKEIDKRLVEAENLKAQATRDEDFERAAYF
RDQIAKYKELQNQKLDDQDTPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVNLSDDLKAHVIGQDAAVDKIAKAIRRNR
VGLGSPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRR
NPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTSKAEASVGFGATREGRTNSVLGELSN
YFSPEFMNRFDGIIEFQALSKDNLLHIVDLMLADVNTRLAYNNIHLDVTDKVKEKLVDLGYDAKMGARPLRRTIQDYIED
AITDYYLENPTEKDLKAMLTSNGNIVIKSTKKLTKTQPIPQQKD
MLCQNCKLNEASIHLYANVNGKQRQIDLCQNCYQIMKTDANNSIWGGMRSNPQNQKDSLNPLFDDFFGDLNNFRAFGDLP
NTPPTQSGRQNGSGGAGGGNNHNGQGAISGQNARQPQREPGLLEEFGINVTDIARNGDIDPVIGRDEEIIRVIEILNRRT
KNNPVLIGEPGVGKTAVVEGLAQKIVDGSVPHKLQHKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDE
IHEIVGAGTAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQAKYED
YHHVKYSQDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFIDPKEIDKRLVEAENLKAQATRDEDFERAAYF
RDQIAKYKELQNQKLDDQDTPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVNLSDDLKAHVIGQDAAVDKIAKAIRRNR
VGLGSPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRR
NPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTSKAEASVGFGATREGRTNSVLGELSN
YFSPEFMNRFDGIIEFQALSKDNLLHIVDLMLADVNTRLAYNNIHLDVTDKVKEKLVDLGYDAKMGARPLRRTIQDYIED
AITDYYLENPTEKDLKAMLTSNGNIVIKSTKKLTKTQPIPQQKD
Nucleotide
Download Length: 2295 bp
>NTDB_id=1139790 DQM45_RS02720 WP_003085648.1 535409..537703(-) (clpE) [Streptococcus porcinus strain NCTC10999]
ATGCTTTGTCAAAACTGTAAATTAAACGAGGCCTCTATTCACCTATATGCTAATGTGAATGGGAAGCAAAGACAAATTGA
CCTTTGTCAAAACTGTTATCAAATTATGAAGACTGATGCAAACAACTCGATTTGGGGCGGCATGCGTTCTAACCCCCAAA
ATCAAAAAGATTCTTTAAACCCTTTATTTGATGATTTCTTTGGTGATCTCAATAACTTTAGAGCTTTTGGGGACTTACCA
AATACGCCTCCAACCCAATCTGGCCGGCAAAATGGTAGTGGTGGGGCTGGTGGAGGCAACAACCACAACGGCCAAGGAGC
AATTTCTGGCCAAAACGCAAGACAACCTCAAAGAGAGCCCGGTCTCCTTGAAGAGTTTGGGATTAATGTGACTGATATCG
CAAGAAATGGTGATATTGATCCTGTTATTGGTCGCGACGAAGAGATTATTCGCGTTATTGAAATTTTGAATCGACGAACT
AAGAATAATCCCGTCTTGATTGGTGAGCCAGGAGTTGGTAAAACTGCAGTTGTAGAAGGCTTGGCTCAGAAAATCGTTGA
TGGCAGTGTTCCTCATAAACTACAACATAAAGAGGTTATCCGTTTAGACGTAGTTAGTCTAGTCCAAGGAACTGGTATTC
GTGGACAATTTGAAGAACGTATGCAAAAATTAATGGAAGAGATTCGTAACCGTCAAGATGTTATTCTCTTCATTGATGAG
ATTCATGAAATAGTTGGTGCTGGTACTGCTGGAGATGGCAATATGGATGCTGGCAATATCTTAAAACCAGCCTTAGCGCG
CGGTGAGTTACAGTTGGTTGGGGCAACTACACTCAACGAATACCGCATCATCGAAAAAGATGCAGCCTTAGAGCGTCGAA
TGCAACCTGTTAAGGTTGATGAGCCTTCTGTGGAAGAAACCATTACCATTCTTAAAGGGATTCAAGCCAAATACGAAGAC
TATCATCATGTCAAATACAGTCAAGATGCCATTGAAGCAGCTGCTAATTTATCGAATCGATATATCCAAGATCGTTTCTT
ACCGGATAAAGCTATTGATTTACTTGATGAAGCTGGTTCAAAAATGAATTTAACTCTTAATTTCATTGATCCTAAAGAAA
TTGATAAACGTTTAGTGGAAGCCGAAAATTTAAAAGCGCAAGCCACCCGCGATGAAGATTTTGAACGCGCAGCTTATTTC
CGCGACCAAATCGCTAAGTACAAGGAGCTACAAAATCAAAAGTTAGACGATCAAGATACTCCTATCATTACTGAAAAGAC
TATTGAAGCAATTGTTGAGCAAAAAACTAATATTCCTGTTGGTGACCTCAAAGAAAAAGAACAATCTCAATTAGTCAACC
TATCAGATGATTTGAAAGCTCATGTGATCGGTCAAGATGCTGCTGTTGATAAAATTGCTAAAGCTATTCGTCGCAATCGT
GTCGGTTTAGGTAGCCCAAATCGACCAATTGGATCTTTCCTCTTTGTAGGTCCGACTGGAGTAGGGAAAACGGAATTATC
TAAACAATTAGCCATTGAACTCTTCGGTTCAGCTGATAATATGATTCGTTTTGACATGTCTGAATATATGGAAAAACACG
CTGTTGCTAAGCTAGTGGGCGCTCCTCCAGGATATGTGGGGTATGAAGAAGCTGGTCAATTAACAGAAAAAGTCAGACGA
AATCCCTATTCACTGATACTATTAGACGAAGTTGAAAAAGCTCACCCTGATGTTATGCATATGTTTCTTCAAGTTTTAGA
TGACGGTAGGCTCACTGATGGACAAGGGCGAACAGTCAGCTTTAAAGATACTATTATCATCATGACATCAAATGCAGGTA
CCAGCAAAGCTGAAGCCTCTGTTGGTTTTGGTGCAACACGCGAAGGACGTACTAATTCTGTTCTAGGAGAATTAAGTAAT
TACTTCAGTCCAGAATTTATGAACCGTTTTGATGGCATCATTGAATTCCAAGCATTAAGTAAAGACAATTTATTACATAT
CGTTGATTTAATGTTAGCCGATGTCAATACACGCTTAGCATATAATAATATTCACCTAGATGTTACAGATAAGGTGAAGG
AAAAATTAGTTGATCTTGGCTATGATGCTAAGATGGGTGCTCGTCCACTTAGAAGAACGATTCAAGATTATATTGAAGAT
GCTATCACTGACTACTATCTTGAAAACCCAACTGAGAAAGATCTGAAAGCCATGTTGACTAGTAATGGCAATATAGTTAT
CAAAAGTACCAAAAAACTTACTAAAACACAGCCTATTCCTCAGCAAAAGGACTAA
ATGCTTTGTCAAAACTGTAAATTAAACGAGGCCTCTATTCACCTATATGCTAATGTGAATGGGAAGCAAAGACAAATTGA
CCTTTGTCAAAACTGTTATCAAATTATGAAGACTGATGCAAACAACTCGATTTGGGGCGGCATGCGTTCTAACCCCCAAA
ATCAAAAAGATTCTTTAAACCCTTTATTTGATGATTTCTTTGGTGATCTCAATAACTTTAGAGCTTTTGGGGACTTACCA
AATACGCCTCCAACCCAATCTGGCCGGCAAAATGGTAGTGGTGGGGCTGGTGGAGGCAACAACCACAACGGCCAAGGAGC
AATTTCTGGCCAAAACGCAAGACAACCTCAAAGAGAGCCCGGTCTCCTTGAAGAGTTTGGGATTAATGTGACTGATATCG
CAAGAAATGGTGATATTGATCCTGTTATTGGTCGCGACGAAGAGATTATTCGCGTTATTGAAATTTTGAATCGACGAACT
AAGAATAATCCCGTCTTGATTGGTGAGCCAGGAGTTGGTAAAACTGCAGTTGTAGAAGGCTTGGCTCAGAAAATCGTTGA
TGGCAGTGTTCCTCATAAACTACAACATAAAGAGGTTATCCGTTTAGACGTAGTTAGTCTAGTCCAAGGAACTGGTATTC
GTGGACAATTTGAAGAACGTATGCAAAAATTAATGGAAGAGATTCGTAACCGTCAAGATGTTATTCTCTTCATTGATGAG
ATTCATGAAATAGTTGGTGCTGGTACTGCTGGAGATGGCAATATGGATGCTGGCAATATCTTAAAACCAGCCTTAGCGCG
CGGTGAGTTACAGTTGGTTGGGGCAACTACACTCAACGAATACCGCATCATCGAAAAAGATGCAGCCTTAGAGCGTCGAA
TGCAACCTGTTAAGGTTGATGAGCCTTCTGTGGAAGAAACCATTACCATTCTTAAAGGGATTCAAGCCAAATACGAAGAC
TATCATCATGTCAAATACAGTCAAGATGCCATTGAAGCAGCTGCTAATTTATCGAATCGATATATCCAAGATCGTTTCTT
ACCGGATAAAGCTATTGATTTACTTGATGAAGCTGGTTCAAAAATGAATTTAACTCTTAATTTCATTGATCCTAAAGAAA
TTGATAAACGTTTAGTGGAAGCCGAAAATTTAAAAGCGCAAGCCACCCGCGATGAAGATTTTGAACGCGCAGCTTATTTC
CGCGACCAAATCGCTAAGTACAAGGAGCTACAAAATCAAAAGTTAGACGATCAAGATACTCCTATCATTACTGAAAAGAC
TATTGAAGCAATTGTTGAGCAAAAAACTAATATTCCTGTTGGTGACCTCAAAGAAAAAGAACAATCTCAATTAGTCAACC
TATCAGATGATTTGAAAGCTCATGTGATCGGTCAAGATGCTGCTGTTGATAAAATTGCTAAAGCTATTCGTCGCAATCGT
GTCGGTTTAGGTAGCCCAAATCGACCAATTGGATCTTTCCTCTTTGTAGGTCCGACTGGAGTAGGGAAAACGGAATTATC
TAAACAATTAGCCATTGAACTCTTCGGTTCAGCTGATAATATGATTCGTTTTGACATGTCTGAATATATGGAAAAACACG
CTGTTGCTAAGCTAGTGGGCGCTCCTCCAGGATATGTGGGGTATGAAGAAGCTGGTCAATTAACAGAAAAAGTCAGACGA
AATCCCTATTCACTGATACTATTAGACGAAGTTGAAAAAGCTCACCCTGATGTTATGCATATGTTTCTTCAAGTTTTAGA
TGACGGTAGGCTCACTGATGGACAAGGGCGAACAGTCAGCTTTAAAGATACTATTATCATCATGACATCAAATGCAGGTA
CCAGCAAAGCTGAAGCCTCTGTTGGTTTTGGTGCAACACGCGAAGGACGTACTAATTCTGTTCTAGGAGAATTAAGTAAT
TACTTCAGTCCAGAATTTATGAACCGTTTTGATGGCATCATTGAATTCCAAGCATTAAGTAAAGACAATTTATTACATAT
CGTTGATTTAATGTTAGCCGATGTCAATACACGCTTAGCATATAATAATATTCACCTAGATGTTACAGATAAGGTGAAGG
AAAAATTAGTTGATCTTGGCTATGATGCTAAGATGGGTGCTCGTCCACTTAGAAGAACGATTCAAGATTATATTGAAGAT
GCTATCACTGACTACTATCTTGAAAACCCAACTGAGAAAGATCTGAAAGCCATGTTGACTAGTAATGGCAATATAGTTAT
CAAAAGTACCAAAAAACTTACTAAAACACAGCCTATTCCTCAGCAAAAGGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
84.768 |
98.822 |
0.838 |
| clpE | Streptococcus pneumoniae Rx1 |
83.644 |
98.429 |
0.823 |
| clpE | Streptococcus pneumoniae D39 |
83.644 |
98.429 |
0.823 |
| clpE | Streptococcus pneumoniae R6 |
83.644 |
98.429 |
0.823 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.511 |
98.429 |
0.822 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
73.976 |
99.084 |
0.733 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.335 |
88.22 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
47.987 |
81.283 |
0.39 |
| clpC | Streptococcus pneumoniae Rx1 |
47.987 |
81.283 |
0.39 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.826 |
81.283 |
0.389 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.04 |
81.806 |
0.385 |
| clpC | Streptococcus mutans UA159 |
46.86 |
81.283 |
0.381 |
| clpC | Streptococcus thermophilus LMD-9 |
46.549 |
81.545 |
0.38 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.228 |
81.545 |
0.377 |