Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQM82_RS07715 Genome accession   NZ_LS483386
Coordinates   1499573..1500298 (-) Length   241 a.a.
NCBI ID   WP_023611908.1    Uniprot ID   A0A5S4TEK9
Organism   Streptococcus pyogenes strain NCTC13742     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1494573..1505298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM82_RS07680 (NCTC13742_01522) rnpM 1494607..1494903 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  DQM82_RS07685 (NCTC13742_01523) nusA 1494919..1496076 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  DQM82_RS07690 (NCTC13742_01524) rimP 1496251..1496787 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQM82_RS07700 (NCTC13742_01526) trmB 1497046..1497681 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM82_RS07705 (NCTC13742_01527) ccrZ 1497681..1498472 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM82_RS07710 (NCTC13742_01528) - 1498536..1499570 (-) 1035 WP_023611934.1 ABC transporter permease -
  DQM82_RS07715 (NCTC13742_01529) pptA 1499573..1500298 (-) 726 WP_023611908.1 ABC transporter ATP-binding protein Regulator
  DQM82_RS07720 (NCTC13742_01530) - 1500370..1500789 (+) 420 WP_023611931.1 HIT family protein -
  DQM82_RS07725 (NCTC13742_01531) - 1500786..1501142 (+) 357 WP_014407784.1 hypothetical protein -
  DQM82_RS07730 (NCTC13742_01532) brpA 1501253..1502536 (-) 1284 WP_023611938.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM82_RS07735 (NCTC13742_01533) - 1502545..1503069 (-) 525 WP_023611919.1 GNAT family N-acetyltransferase -
  DQM82_RS07740 (NCTC13742_01534) tsaE 1503044..1503505 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM82_RS07745 (NCTC13742_01535) - 1503659..1505119 (-) 1461 WP_023611933.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26704.78 Da        Isoelectric Point: 4.4883

>NTDB_id=1139711 DQM82_RS07715 WP_023611908.1 1499573..1500298(-) (pptA) [Streptococcus pyogenes strain NCTC13742]
MLNIKNLTGGYYNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1139711 DQM82_RS07715 WP_023611908.1 1499573..1500298(-) (pptA) [Streptococcus pyogenes strain NCTC13742]
ATGTTAAACATTAAAAATCTAACAGGAGGATATTACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5S4TEK9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment