Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DQM63_RS11775 Genome accession   NZ_LS483385
Coordinates   184475..185263 (+) Length   262 a.a.
NCBI ID   WP_373276230.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC7863     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 179475..190263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM63_RS00990 (NCTC7863_00192) galU 179682..180587 (-) 906 WP_002893959.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  DQM63_RS00995 (NCTC7863_00193) - 180604..181626 (-) 1023 WP_002902119.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  DQM63_RS01000 (NCTC7863_00194) - 181786..183492 (+) 1707 WP_032910568.1 ABC transporter ATP-binding protein -
  DQM63_RS11765 - 183494..183632 (+) 139 Protein_172 ABC transporter ATP-binding protein -
  DQM63_RS11770 - 183608..184339 (+) 732 Protein_173 ABC transporter ATP-binding protein -
  DQM63_RS11775 rcrQ 184475..185263 (+) 789 WP_373276230.1 ABC transporter ATP-binding protein Regulator
  DQM63_RS01010 (NCTC7863_00196) amiA 185381..187354 (-) 1974 WP_002914124.1 peptide ABC transporter substrate-binding protein Regulator
  DQM63_RS01015 (NCTC7863_00197) - 187583..188272 (+) 690 WP_002893948.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  DQM63_RS01025 (NCTC7863_00198) - 188538..188987 (+) 450 WP_002914123.1 8-oxo-dGTP diphosphatase -
  DQM63_RS01035 (NCTC7863_00199) - 189072..189515 (+) 444 WP_002899178.1 dUTP diphosphatase -
  DQM63_RS01040 (NCTC7863_00200) - 189517..190032 (+) 516 WP_002914120.1 histidine phosphatase family protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29157.81 Da        Isoelectric Point: 4.4043

>NTDB_id=1139666 DQM63_RS11775 WP_373276230.1 184475..185263(+) (rcrQ) [Streptococcus sanguinis strain NCTC7863]
MFDAPEEVRPENAPAFTELTDSVEIKHVDFSYVEGKPILKDVSILAPKGKMTAVVGPTGSGKTTIMNLLNRFYDVDSGSI
EFDGRDIRDYELDSLRSHVGIVLQDSVLFSGTIRDNIRFGVPDASQEMVETAARATHIHDYIESLPDKYDTLVDDDQNIF
STGQKQLISIARTLLTDPQVLILDEATSNVDTVTESKIQQAMEAVVAGRTSFVIAHRLKTILNADQIIVLKDGEVIEQGD
HHQLLKLGGFYSELYHNQFVFE

Nucleotide


Download         Length: 789 bp        

>NTDB_id=1139666 DQM63_RS11775 WP_373276230.1 184475..185263(+) (rcrQ) [Streptococcus sanguinis strain NCTC7863]
ATGTTTGATGCGCCGGAGGAAGTCCGGCCAGAGAATGCACCTGCATTCACAGAGCTCACAGACTCCGTGGAGATCAAGCA
TGTGGACTTCTCTTATGTGGAAGGCAAGCCTATTCTCAAAGACGTATCTATTTTAGCTCCTAAGGGCAAGATGACGGCTG
TTGTCGGCCCTACTGGATCAGGTAAGACGACCATTATGAACCTGCTCAATCGCTTTTATGATGTAGATAGTGGCAGCATT
GAGTTTGACGGTCGTGACATTCGAGATTATGAGCTAGATAGCCTACGGAGCCATGTGGGGATTGTCTTGCAGGATTCGGT
GCTCTTTAGTGGTACGATTCGGGACAATATCCGCTTCGGTGTGCCGGATGCTAGTCAGGAGATGGTAGAAACGGCTGCGC
GTGCGACTCATATCCATGACTATATCGAAAGTCTGCCAGACAAATACGATACCCTGGTAGATGATGATCAGAATATTTTC
TCAACTGGGCAGAAACAGCTGATTTCCATTGCTAGAACATTGCTGACGGATCCGCAAGTCTTGATTTTGGACGAAGCGAC
TTCTAATGTCGATACGGTGACGGAGAGTAAGATTCAGCAAGCTATGGAAGCCGTTGTGGCTGGCCGAACTAGCTTTGTCA
TTGCTCACCGTCTCAAGACAATCCTCAATGCTGACCAGATTATCGTCCTCAAAGACGGAGAGGTCATTGAACAGGGCGAT
CATCACCAACTCCTCAAACTAGGTGGCTTCTACTCAGAACTTTATCACAACCAGTTTGTCTTTGAGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(39-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

48.649

98.855

0.481

Multiple sequence alignment