Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQM87_RS02350 Genome accession   NZ_LS483384
Coordinates   435371..436096 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13743     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 430371..441096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM87_RS02320 (NCTC13743_00458) - 430559..432019 (+) 1461 WP_111704936.1 NCS2 family permease -
  DQM87_RS02325 (NCTC13743_00459) tsaE 432173..432634 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM87_RS02330 (NCTC13743_00460) - 432609..433133 (+) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  DQM87_RS02335 (NCTC13743_00461) brpA 433142..434416 (+) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM87_RS02340 (NCTC13743_00462) - 434527..434883 (-) 357 WP_009880754.1 hypothetical protein -
  DQM87_RS02345 (NCTC13743_00463) - 434880..435299 (-) 420 WP_002983376.1 HIT family protein -
  DQM87_RS02350 (NCTC13743_00464) pptA 435371..436096 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQM87_RS02355 (NCTC13743_00465) - 436099..437133 (+) 1035 WP_010922583.1 ABC transporter permease -
  DQM87_RS02360 (NCTC13743_00466) ccrZ 437197..437988 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM87_RS02365 (NCTC13743_00467) trmB 437988..438623 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM87_RS02375 (NCTC13743_00469) rimP 438882..439418 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  DQM87_RS02380 (NCTC13743_00470) nusA 439593..440750 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  DQM87_RS02385 (NCTC13743_00471) rnpM 440766..441062 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1139566 DQM87_RS02350 WP_002983379.1 435371..436096(+) (pptA) [Streptococcus pyogenes strain NCTC13743]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1139566 DQM87_RS02350 WP_002983379.1 435371..436096(+) (pptA) [Streptococcus pyogenes strain NCTC13743]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment