Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DQM89_RS09855 Genome accession   NZ_LS483382
Coordinates   54223..54318 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13738     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49223..59318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM89_RS00320 (NCTC13738_00064) - 50112..51809 (+) 1698 WP_020904816.1 AIPR family protein -
  DQM89_RS00325 (NCTC13738_00065) purB 51827..53119 (+) 1293 WP_076634013.1 adenylosuccinate lyase -
  DQM89_RS00330 (NCTC13738_00066) rgg4 53253..54139 (+) 887 Protein_32 transcriptional regulator Rgg4/ComR -
  DQM89_RS09855 (NCTC13738_00067) comS 54223..54318 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  DQM89_RS00335 (NCTC13738_00068) ruvB 54365..55363 (+) 999 WP_063629365.1 Holliday junction branch migration DNA helicase RuvB -
  DQM89_RS00340 (NCTC13738_00069) - 55501..55938 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  DQM89_RS00345 (NCTC13738_00070) - 55961..56362 (+) 402 WP_011017240.1 MORN repeat-containing protein -
  DQM89_RS00350 (NCTC13738_00071) - 56359..58134 (+) 1776 WP_076634012.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1139478 DQM89_RS09855 WP_198462994.1 54223..54318(+) (comS) [Streptococcus pyogenes strain NCTC13738]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1139478 DQM89_RS09855 WP_198462994.1 54223..54318(+) (comS) [Streptococcus pyogenes strain NCTC13738]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment