Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   DQM89_RS07435 Genome accession   NZ_LS483382
Coordinates   1422528..1423253 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC13738     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1417528..1428253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM89_RS07400 (NCTC13738_01478) - 1417662..1418045 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  DQM89_RS07405 (NCTC13738_01479) - 1418056..1418607 (+) 552 WP_002988670.1 hypothetical protein -
  DQM89_RS07410 (NCTC13738_01480) - 1418724..1419803 (+) 1080 WP_002988667.1 site-specific integrase -
  DQM89_RS07420 (NCTC13738_01482) trmB 1420001..1420636 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM89_RS07425 (NCTC13738_01483) ccrZ 1420636..1421427 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  DQM89_RS07430 (NCTC13738_01484) - 1421491..1422525 (-) 1035 WP_076634067.1 ABC transporter permease -
  DQM89_RS07435 (NCTC13738_01485) pptA 1422528..1423253 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DQM89_RS07440 (NCTC13738_01486) - 1423325..1423744 (+) 420 WP_076634066.1 HIT family protein -
  DQM89_RS07445 (NCTC13738_01487) - 1423741..1424097 (+) 357 WP_002988657.1 hypothetical protein -
  DQM89_RS07450 (NCTC13738_01488) brpA 1424208..1425491 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM89_RS07455 (NCTC13738_01489) - 1425500..1426024 (-) 525 WP_076634065.1 GNAT family N-acetyltransferase -
  DQM89_RS07460 (NCTC13738_01490) tsaE 1425999..1426460 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM89_RS07465 (NCTC13738_01491) - 1426614..1428074 (-) 1461 WP_023079950.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1139467 DQM89_RS07435 WP_002983379.1 1422528..1423253(-) (pptA) [Streptococcus pyogenes strain NCTC13738]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1139467 DQM89_RS07435 WP_002983379.1 1422528..1423253(-) (pptA) [Streptococcus pyogenes strain NCTC13738]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714


Multiple sequence alignment