Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DQM69_RS09775 | Genome accession | NZ_LS483381 |
| Coordinates | 2005158..2007608 (-) | Length | 816 a.a. |
| NCBI ID | WP_019768851.1 | Uniprot ID | - |
| Organism | Streptococcus sobrinus strain NCTC10921 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2000158..2012608
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM69_RS09750 (NCTC10921_01948) | hslO | 2000728..2001600 (+) | 873 | WP_028798562.1 | Hsp33 family molecular chaperone HslO | - |
| DQM69_RS09755 (NCTC10921_01949) | dusB | 2001587..2002567 (+) | 981 | WP_002960762.1 | tRNA dihydrouridine synthase DusB | - |
| DQM69_RS09760 (NCTC10921_01950) | - | 2002603..2003502 (+) | 900 | WP_301950682.1 | C4-dicarboxylate ABC transporter | - |
| DQM69_RS09765 (NCTC10921_01951) | - | 2003515..2004471 (+) | 957 | WP_109982780.1 | YdcF family protein | - |
| DQM69_RS09770 | - | 2004579..2004785 (-) | 207 | WP_019768852.1 | hypothetical protein | - |
| DQM69_RS09775 (NCTC10921_01952) | clpC | 2005158..2007608 (-) | 2451 | WP_019768851.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQM69_RS09780 (NCTC10921_01953) | - | 2007601..2008068 (-) | 468 | WP_002963295.1 | CtsR family transcriptional regulator | - |
| DQM69_RS09785 (NCTC10921_01954) | tsf | 2008413..2009453 (-) | 1041 | WP_019768850.1 | translation elongation factor Ts | - |
| DQM69_RS09790 (NCTC10921_01955) | rpsB | 2009584..2010357 (-) | 774 | WP_002959771.1 | 30S ribosomal protein S2 | - |
| DQM69_RS09795 (NCTC10921_01956) | - | 2010551..2012398 (-) | 1848 | WP_019775168.1 | APC family permease | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90936.22 Da Isoelectric Point: 6.1070
>NTDB_id=1139420 DQM69_RS09775 WP_019768851.1 2005158..2007608(-) (clpC) [Streptococcus sobrinus strain NCTC10921]
MTDYSLKMQEIFSRAQYQAARYQSQFLETWHLLLAMVDTDETVAHLALLDFADQIDLDEYEDATMLVIRRKPIKVAQLNQ
VLPTSRALERILAYATRIAGAVKAPQVGSEHVLLSMMFGRDNLAARILEQVGFHFQDEGKDNLRLIDLRKVIERYAGFSK
EDVKAIFDLAKPKKSGNNNFSNMMGGPQPTTGDLADFTRDLTALAAQGQLEKVVGRDEEIMRMLQILSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVEGEVPYELANFRVLELDMMSVVAGTRFRGDFEERMNQIIADIEADGHIILFVDEVHTIMGSGS
GIDSTLDAANILKPALSRGTLHMIGATTQEEYSKHIEKDAALSRRFARVLIEEPTVDEAYQILLGLRGSYESYHNVTISD
QAVLTAVKSAHRYLTSKNLPDSAIDLLDEASAMVQNTVKRSLPTFLSSADQALLSGNLEAVAGLLKTEEDKQKIHKPVAV
REEDILRTLSKLSGIPLEKMTQADNQRYLNLEKELHKRVIGQEDAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTGVGK
TELAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRQKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGIRQDYQAMQGRIMEELRKAYRPEFINRIDEKIVF
HSLTPDHMRQVVKLMLKPLAATLTEKQIDLKVQPAALKLLAEHGYDPEMGARPLRRTIQTEVEDRLSELLLSGQLKADSK
LKIGSHKGSLKFTIDD
MTDYSLKMQEIFSRAQYQAARYQSQFLETWHLLLAMVDTDETVAHLALLDFADQIDLDEYEDATMLVIRRKPIKVAQLNQ
VLPTSRALERILAYATRIAGAVKAPQVGSEHVLLSMMFGRDNLAARILEQVGFHFQDEGKDNLRLIDLRKVIERYAGFSK
EDVKAIFDLAKPKKSGNNNFSNMMGGPQPTTGDLADFTRDLTALAAQGQLEKVVGRDEEIMRMLQILSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVEGEVPYELANFRVLELDMMSVVAGTRFRGDFEERMNQIIADIEADGHIILFVDEVHTIMGSGS
GIDSTLDAANILKPALSRGTLHMIGATTQEEYSKHIEKDAALSRRFARVLIEEPTVDEAYQILLGLRGSYESYHNVTISD
QAVLTAVKSAHRYLTSKNLPDSAIDLLDEASAMVQNTVKRSLPTFLSSADQALLSGNLEAVAGLLKTEEDKQKIHKPVAV
REEDILRTLSKLSGIPLEKMTQADNQRYLNLEKELHKRVIGQEDAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTGVGK
TELAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRQKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGIRQDYQAMQGRIMEELRKAYRPEFINRIDEKIVF
HSLTPDHMRQVVKLMLKPLAATLTEKQIDLKVQPAALKLLAEHGYDPEMGARPLRRTIQTEVEDRLSELLLSGQLKADSK
LKIGSHKGSLKFTIDD
Nucleotide
Download Length: 2451 bp
>NTDB_id=1139420 DQM69_RS09775 WP_019768851.1 2005158..2007608(-) (clpC) [Streptococcus sobrinus strain NCTC10921]
ATGACTGATTATTCCCTGAAAATGCAAGAAATATTTAGCCGGGCCCAGTACCAGGCTGCCCGTTACCAAAGTCAATTTTT
GGAGACCTGGCATCTTCTTCTAGCCATGGTGGATACCGATGAGACGGTAGCTCATTTGGCTCTGCTGGATTTTGCGGATC
AAATTGATTTGGATGAATACGAGGATGCAACCATGCTGGTCATCCGTCGTAAGCCAATCAAGGTTGCTCAGCTTAATCAA
GTTTTACCGACATCAAGAGCCTTGGAGCGTATTCTGGCCTATGCCACTCGCATCGCTGGAGCTGTAAAAGCACCTCAAGT
TGGTAGTGAGCACGTTCTTTTGTCCATGATGTTTGGGCGTGACAATCTAGCCGCTAGGATTTTGGAGCAGGTCGGTTTTC
ATTTTCAAGATGAGGGCAAGGATAATCTTCGATTGATTGACCTGCGCAAGGTTATCGAGCGCTACGCAGGCTTTTCTAAG
GAAGATGTCAAGGCTATTTTTGACTTGGCCAAGCCCAAGAAATCTGGCAATAACAACTTTAGCAATATGATGGGCGGACC
TCAGCCAACAACGGGTGATTTAGCCGATTTCACCCGTGATTTGACAGCTCTAGCTGCTCAAGGTCAGCTGGAAAAGGTTG
TCGGCCGTGATGAGGAAATCATGCGGATGTTGCAAATTCTCAGCCGTAAGACCAAGAATAATCCTGTCTTGGTCGGTGAT
GCCGGTGTCGGAAAGACAGCCCTGGCTTACGGTCTGGCCCAGAGAATTGTCGAGGGAGAGGTCCCATATGAATTAGCCAA
CTTCCGAGTTTTGGAATTGGACATGATGTCAGTTGTGGCTGGTACCCGCTTTCGAGGTGACTTTGAAGAGCGCATGAATC
AGATTATTGCGGATATTGAGGCCGATGGTCATATCATCCTCTTTGTTGATGAGGTTCACACTATTATGGGCTCTGGTAGC
GGTATTGATAGCACCCTAGATGCTGCTAATATTCTTAAGCCGGCTCTTTCTAGAGGAACCCTCCACATGATTGGGGCAAC
GACCCAAGAAGAGTATTCTAAGCATATTGAAAAGGATGCCGCTCTATCTCGTCGCTTTGCTAGGGTTTTGATTGAAGAGC
CAACGGTTGATGAGGCCTATCAGATTCTATTAGGATTGAGGGGTAGCTATGAAAGTTACCATAATGTTACCATCTCTGAC
CAGGCTGTCTTAACGGCTGTCAAATCGGCCCATCGCTATTTGACCAGCAAGAACCTGCCCGATTCAGCTATTGATCTGCT
GGATGAAGCCAGTGCTATGGTACAAAATACGGTGAAACGTTCCTTGCCGACCTTTCTCAGTTCGGCTGACCAAGCCCTCC
TCTCTGGAAATCTGGAAGCCGTCGCTGGCCTCCTTAAGACGGAAGAAGATAAGCAGAAGATTCACAAGCCTGTCGCCGTC
AGGGAAGAGGACATCCTGCGGACCCTCAGCAAACTCTCAGGTATTCCGCTTGAGAAGATGACCCAGGCTGATAATCAGCG
TTACCTCAATTTGGAAAAGGAACTCCACAAGCGGGTTATCGGTCAAGAGGATGCTGTCTCAGCTGTTTCCAGAGCCATTC
GCCGTAACCAGTCGGGTATCCGGACCGGCAAGCGGCCAATCGGTTCCTTCATGTTCCTAGGGCCAACTGGGGTTGGTAAA
ACCGAGTTGGCCAAGGCCCTAGCTGAGCTCCTCTTTGATGATGAGTCAGCTCTGATTCGCTTTGATATGTCCGAGTACAT
GGAAAAATTTGCTGCCAGCCGGCTCAACGGAGCTCCTCCAGGCTATGTTGGTTACGAAGAAGGAGGCGAATTGACCGAGA
AGGTGCGCCAGAAGCCTTATTCTGTCCTCCTCTTTGATGAGGTAGAAAAGGCTCACCCTGACATCTTCAATGTCCTCCTC
CAGGTGCTGGATGATGGGGTATTGACCGACAGTCGTGGGCGCAAAGTTGATTTCTCTAATACCATCATTATCATGACCAG
CAATTTGGGGGCGACGGCTCTTCGAGATGATAAAACCGTTGGCTTTGGTGCCAAGGGCATCAGGCAGGATTACCAAGCTA
TGCAAGGACGAATTATGGAAGAACTCAGAAAAGCCTACCGGCCTGAATTCATCAATCGGATTGATGAGAAGATTGTCTTC
CACAGTTTAACACCAGACCACATGCGTCAAGTTGTTAAGTTGATGCTGAAACCACTGGCAGCTACCCTGACTGAGAAGCA
AATCGACCTTAAAGTTCAGCCAGCTGCTCTCAAACTCTTGGCTGAGCATGGTTATGATCCAGAAATGGGAGCTCGGCCTT
TACGCCGAACCATTCAAACTGAAGTTGAAGACAGATTGTCCGAATTGCTCCTGTCAGGCCAATTAAAGGCCGATTCCAAA
CTAAAAATTGGCAGCCACAAGGGCAGTCTGAAATTTACCATTGATGACTAG
ATGACTGATTATTCCCTGAAAATGCAAGAAATATTTAGCCGGGCCCAGTACCAGGCTGCCCGTTACCAAAGTCAATTTTT
GGAGACCTGGCATCTTCTTCTAGCCATGGTGGATACCGATGAGACGGTAGCTCATTTGGCTCTGCTGGATTTTGCGGATC
AAATTGATTTGGATGAATACGAGGATGCAACCATGCTGGTCATCCGTCGTAAGCCAATCAAGGTTGCTCAGCTTAATCAA
GTTTTACCGACATCAAGAGCCTTGGAGCGTATTCTGGCCTATGCCACTCGCATCGCTGGAGCTGTAAAAGCACCTCAAGT
TGGTAGTGAGCACGTTCTTTTGTCCATGATGTTTGGGCGTGACAATCTAGCCGCTAGGATTTTGGAGCAGGTCGGTTTTC
ATTTTCAAGATGAGGGCAAGGATAATCTTCGATTGATTGACCTGCGCAAGGTTATCGAGCGCTACGCAGGCTTTTCTAAG
GAAGATGTCAAGGCTATTTTTGACTTGGCCAAGCCCAAGAAATCTGGCAATAACAACTTTAGCAATATGATGGGCGGACC
TCAGCCAACAACGGGTGATTTAGCCGATTTCACCCGTGATTTGACAGCTCTAGCTGCTCAAGGTCAGCTGGAAAAGGTTG
TCGGCCGTGATGAGGAAATCATGCGGATGTTGCAAATTCTCAGCCGTAAGACCAAGAATAATCCTGTCTTGGTCGGTGAT
GCCGGTGTCGGAAAGACAGCCCTGGCTTACGGTCTGGCCCAGAGAATTGTCGAGGGAGAGGTCCCATATGAATTAGCCAA
CTTCCGAGTTTTGGAATTGGACATGATGTCAGTTGTGGCTGGTACCCGCTTTCGAGGTGACTTTGAAGAGCGCATGAATC
AGATTATTGCGGATATTGAGGCCGATGGTCATATCATCCTCTTTGTTGATGAGGTTCACACTATTATGGGCTCTGGTAGC
GGTATTGATAGCACCCTAGATGCTGCTAATATTCTTAAGCCGGCTCTTTCTAGAGGAACCCTCCACATGATTGGGGCAAC
GACCCAAGAAGAGTATTCTAAGCATATTGAAAAGGATGCCGCTCTATCTCGTCGCTTTGCTAGGGTTTTGATTGAAGAGC
CAACGGTTGATGAGGCCTATCAGATTCTATTAGGATTGAGGGGTAGCTATGAAAGTTACCATAATGTTACCATCTCTGAC
CAGGCTGTCTTAACGGCTGTCAAATCGGCCCATCGCTATTTGACCAGCAAGAACCTGCCCGATTCAGCTATTGATCTGCT
GGATGAAGCCAGTGCTATGGTACAAAATACGGTGAAACGTTCCTTGCCGACCTTTCTCAGTTCGGCTGACCAAGCCCTCC
TCTCTGGAAATCTGGAAGCCGTCGCTGGCCTCCTTAAGACGGAAGAAGATAAGCAGAAGATTCACAAGCCTGTCGCCGTC
AGGGAAGAGGACATCCTGCGGACCCTCAGCAAACTCTCAGGTATTCCGCTTGAGAAGATGACCCAGGCTGATAATCAGCG
TTACCTCAATTTGGAAAAGGAACTCCACAAGCGGGTTATCGGTCAAGAGGATGCTGTCTCAGCTGTTTCCAGAGCCATTC
GCCGTAACCAGTCGGGTATCCGGACCGGCAAGCGGCCAATCGGTTCCTTCATGTTCCTAGGGCCAACTGGGGTTGGTAAA
ACCGAGTTGGCCAAGGCCCTAGCTGAGCTCCTCTTTGATGATGAGTCAGCTCTGATTCGCTTTGATATGTCCGAGTACAT
GGAAAAATTTGCTGCCAGCCGGCTCAACGGAGCTCCTCCAGGCTATGTTGGTTACGAAGAAGGAGGCGAATTGACCGAGA
AGGTGCGCCAGAAGCCTTATTCTGTCCTCCTCTTTGATGAGGTAGAAAAGGCTCACCCTGACATCTTCAATGTCCTCCTC
CAGGTGCTGGATGATGGGGTATTGACCGACAGTCGTGGGCGCAAAGTTGATTTCTCTAATACCATCATTATCATGACCAG
CAATTTGGGGGCGACGGCTCTTCGAGATGATAAAACCGTTGGCTTTGGTGCCAAGGGCATCAGGCAGGATTACCAAGCTA
TGCAAGGACGAATTATGGAAGAACTCAGAAAAGCCTACCGGCCTGAATTCATCAATCGGATTGATGAGAAGATTGTCTTC
CACAGTTTAACACCAGACCACATGCGTCAAGTTGTTAAGTTGATGCTGAAACCACTGGCAGCTACCCTGACTGAGAAGCA
AATCGACCTTAAAGTTCAGCCAGCTGCTCTCAAACTCTTGGCTGAGCATGGTTATGATCCAGAAATGGGAGCTCGGCCTT
TACGCCGAACCATTCAAACTGAAGTTGAAGACAGATTGTCCGAATTGCTCCTGTCAGGCCAATTAAAGGCCGATTCCAAA
CTAAAAATTGGCAGCCACAAGGGCAGTCTGAAATTTACCATTGATGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
71.288 |
99.877 |
0.712 |
| clpC | Streptococcus thermophilus LMG 18311 |
69.645 |
100 |
0.697 |
| clpC | Streptococcus thermophilus LMD-9 |
69.645 |
100 |
0.697 |
| clpC | Streptococcus pneumoniae TIGR4 |
65.602 |
99.755 |
0.654 |
| clpC | Streptococcus pneumoniae Rx1 |
65.479 |
99.755 |
0.653 |
| clpC | Streptococcus pneumoniae D39 |
65.479 |
99.755 |
0.653 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.106 |
100 |
0.505 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.41 |
100 |
0.455 |
| clpE | Streptococcus pneumoniae Rx1 |
46.083 |
79.779 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.083 |
79.779 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.083 |
79.779 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46 |
79.657 |
0.366 |
| clpE | Streptococcus mutans UA159 |
46.9 |
77.083 |
0.362 |