Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQM61_RS02445 Genome accession   NZ_LS483379
Coordinates   440984..441793 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10874     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 435984..446793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM61_RS02425 (NCTC10874_00475) - 436426..437673 (+) 1248 WP_002995606.1 AMP-binding protein -
  DQM61_RS02430 (NCTC10874_00476) - 437729..438763 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQM61_RS02435 (NCTC10874_00477) vicR 438925..439635 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQM61_RS02440 (NCTC10874_00478) vicK 439628..440980 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM61_RS02445 (NCTC10874_00479) vicX 440984..441793 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQM61_RS02450 (NCTC10874_00480) rnc 442225..442917 (+) 693 WP_002985639.1 ribonuclease III -
  DQM61_RS02455 (NCTC10874_00481) smc 442918..446457 (+) 3540 WP_111694351.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1139280 DQM61_RS02445 WP_002985641.1 440984..441793(+) (vicX) [Streptococcus pyogenes strain NCTC10874]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1139280 DQM61_RS02445 WP_002985641.1 440984..441793(+) (vicX) [Streptococcus pyogenes strain NCTC10874]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment