Detailed information NTG1139174

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQN19_RS09260
• Genome accession: NZ_LS483376
• Coordinates: 2040566..2041672 (-)
• Length: 368 a.a.
• NCBI ID: WP_016198325.1
• Uniprot ID: -
• Organism: Elizabethkingia meningoseptica strain NCTC10016
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2035566..2046672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN19_RS09235 (NCTC10016_01873)	-	2036721..2037437 (+)	717	WP_016198330.1	DNA alkylation repair protein	-
DQN19_RS09240 (NCTC10016_01874)	-	2037434..2037817 (-)	384	WP_016198329.1	group III truncated hemoglobin	-
DQN19_RS09245 (NCTC10016_01875)	-	2038022..2038513 (+)	492	WP_016198328.1	YkgJ family cysteine cluster protein	-
DQN19_RS09250 (NCTC10016_01876)	-	2038638..2038919 (+)	282	WP_016198327.1	hypothetical protein	-
DQN19_RS09255 (NCTC10016_01877)	gdhA	2039015..2040379 (-)	1365	WP_016198326.1	NADP-specific glutamate dehydrogenase	-
DQN19_RS09260 (NCTC10016_01878)	dprA	2040566..2041672 (-)	1107	WP_016198325.1	DNA-processing protein DprA	Machinery gene
DQN19_RS09265 (NCTC10016_01879)	-	2041707..2042477 (-)	771	WP_016198324.1	rhomboid family intramembrane serine protease	-
DQN19_RS09270 (NCTC10016_01880)	-	2042635..2043756 (+)	1122	WP_034881321.1	DUF3078 domain-containing protein	-
DQN19_RS09275 (NCTC10016_01881)	-	2043762..2045294 (-)	1533	Protein_1818	YifB family Mg chelatase-like AAA ATPase	-
DQN19_RS09280 (NCTC10016_01883)	-	2045553..2045888 (+)	336	WP_231941698.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40725.51 Da
• Isoelectric Point: 6.3919

>NTDB_id=1139174 DQN19_RS09260 WP_016198325.1 2040566..2041672(-) (dprA) [Elizabethkingia meningoseptica strain NCTC10016]
MFSEETLYAIALRHCLLIGDFYFKKLISAAGSAKDAWLLSKKELKKQYGIGDKISGEIGKDTYLLFAEKELQFCLQNNIK
ILLSHRKELPGLLNECDDAPAILYQKGTFSDNTNISIVGTRKTSRYGKEFIADFLHQLKDNHIQTISGLALGADTHVHEE
SLKNNIPTTAVLAHGFQTIYPSANKNLAEKILENGGCLFTEFNSSQDPIRESFIQRNRIIAGISPTTIITETAYGGGSVS
TANFANLYNREVLALPGPIDYKYSQGCNLLISQNKARIISSVPEAIEYLGLSAEKTEQLSLFDSQEVLKGLTPEQALVLT
TITNSSPINPDEISEKTALPVYRILPVILDLELLGYIRATSGRQYRPT

Nucleotide

• Length: 1107 bp

>NTDB_id=1139174 DQN19_RS09260 WP_016198325.1 2040566..2041672(-) (dprA) [Elizabethkingia meningoseptica strain NCTC10016]
ATGTTTTCTGAAGAAACACTTTATGCCATCGCTTTAAGACACTGCCTTTTAATTGGTGATTTTTATTTCAAAAAACTGAT
CTCTGCTGCCGGTTCGGCAAAAGACGCATGGTTGCTATCCAAAAAAGAACTCAAAAAACAATATGGTATCGGAGACAAAA
TCTCAGGGGAAATCGGAAAAGATACTTATTTACTGTTCGCTGAAAAAGAACTGCAATTCTGCCTGCAGAATAATATCAAA
ATATTATTATCACACCGGAAAGAACTCCCGGGACTGCTTAATGAATGTGATGATGCTCCGGCTATTCTTTATCAAAAAGG
TACTTTTAGCGATAACACCAATATTAGTATTGTGGGAACCAGAAAAACATCACGCTACGGAAAAGAATTTATTGCTGATT
TCCTTCATCAGCTGAAAGACAATCATATTCAGACAATTAGTGGTCTTGCATTGGGAGCAGATACCCACGTACATGAAGAA
TCTTTAAAAAACAACATTCCTACAACGGCTGTACTGGCACATGGATTCCAGACTATTTATCCTTCAGCAAATAAAAATCT
GGCAGAGAAAATACTGGAAAACGGAGGCTGCCTCTTCACAGAATTCAATTCATCTCAGGATCCCATCCGCGAAAGTTTTA
TTCAAAGAAACAGGATTATTGCCGGAATATCACCTACAACCATTATCACCGAAACAGCTTATGGCGGAGGTTCGGTAAGT
ACTGCTAATTTTGCTAACCTATACAATCGTGAGGTTTTAGCCCTCCCCGGCCCTATTGATTATAAATACAGTCAGGGTTG
TAATCTGCTGATTTCACAAAATAAAGCCCGGATTATTTCTTCTGTTCCGGAGGCTATTGAATATTTGGGGCTTTCTGCAG
AAAAAACGGAACAATTGTCTCTTTTTGATTCGCAGGAAGTTCTTAAAGGCCTCACTCCCGAACAGGCCCTTGTCCTTACA
ACAATTACCAACTCTTCACCTATAAATCCGGATGAAATTTCCGAAAAAACAGCTTTGCCTGTTTATCGAATTTTACCGGT
TATTCTCGACCTTGAGCTTTTAGGATACATCAGGGCTACTTCCGGGAGACAATATCGCCCGACATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-362)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.044	98.913	0.554