Detailed information NTG1139108

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: DQM54_RS03195
• Genome accession: NZ_LS483375
• Coordinates: 654681..655724 (+)
• Length: 347 a.a.
• NCBI ID: WP_048777977.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC3165
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 649681..660724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM54_RS03160 (NCTC3165_00628)	-	650218..650511 (-)	294	WP_111723407.1	DUF5960 family protein	-
DQM54_RS03165 (NCTC3165_00629)	-	650489..650863 (-)	375	WP_061594637.1	YolD-like family protein	-
DQM54_RS03170 (NCTC3165_00630)	-	650860..652275 (-)	1416	WP_111723408.1	Y-family DNA polymerase	-
DQM54_RS03175 (NCTC3165_00631)	-	652280..652957 (-)	678	WP_045634728.1	helix-turn-helix domain-containing protein	-
DQM54_RS03180 (NCTC3165_00632)	-	653100..653588 (+)	489	WP_061583596.1	YcxB family protein	-
DQM54_RS03185 (NCTC3165_00633)	rsmD	653662..654210 (+)	549	WP_172455859.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DQM54_RS03190 (NCTC3165_00634)	coaD	654200..654694 (+)	495	WP_111723410.1	pantetheine-phosphate adenylyltransferase	-
DQM54_RS03195 (NCTC3165_00635)	sepM	654681..655724 (+)	1044	WP_048777977.1	SepM family pheromone-processing serine protease	Regulator
DQM54_RS03200 (NCTC3165_00636)	-	655896..656432 (+)	537	WP_045634724.1	YutD family protein	-
DQM54_RS03205 (NCTC3165_00637)	rlmN	656442..657530 (+)	1089	WP_061597644.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
DQM54_RS03210 (NCTC3165_00638)	-	657517..658056 (+)	540	WP_111723411.1	VanZ family protein	-
DQM54_RS03215	trpB	658422..659603 (+)	1182	WP_002907062.1	tryptophan synthase subunit beta	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38065.67 Da
• Isoelectric Point: 6.1221

>NTDB_id=1139108 DQM54_RS03195 WP_048777977.1 654681..655724(+) (sepM) [Streptococcus gordonii strain NCTC3165]
MKKISVYKWPIIIFSSLILLVVSLTVPLPYYIEVPGGAEDIRKVLLVDNKEDKEAGSYEFVTVGVQRATFAHLVYAWLTD
FTDIYSAEEMTGGSSDQEFIRINQFYMETSQNMAKYQGLKTAGKDISMKYLGVYVLQVAKDSTFKGILNIADTVTGVNDK
TFDSSEELVKYVNSQKLGDKVKVTYQEDGQEKSAIGKIIKLENGKNGIGISLIDRTEVTSNIPIEFTTEGIGGPSAGLMF
SLSIYTQLADPTLRDGRVIAGTGTINRDGEVGDIGGIDKKVVSAAKSGASIFFAPNNPVTKEMKKIDPKAKTNYETAVEA
AKKIKTDMKIVPVKTLQDAIDYLKNNK

Nucleotide

• Length: 1044 bp

>NTDB_id=1139108 DQM54_RS03195 WP_048777977.1 654681..655724(+) (sepM) [Streptococcus gordonii strain NCTC3165]
ATGAAAAAAATTAGTGTTTATAAATGGCCCATTATTATTTTTTCAAGCTTGATTTTGCTTGTCGTATCTTTGACGGTTCC
TTTACCATACTATATTGAAGTTCCTGGCGGTGCAGAAGATATTCGAAAGGTCTTGCTGGTTGATAATAAGGAAGATAAGG
AAGCTGGGTCTTACGAGTTTGTAACAGTTGGAGTCCAACGAGCAACCTTTGCTCATCTGGTTTATGCGTGGCTGACTGAT
TTCACGGATATCTACTCTGCTGAAGAAATGACTGGTGGATCATCGGACCAAGAATTTATCCGAATCAATCAGTTTTATAT
GGAAACATCCCAAAACATGGCCAAGTACCAAGGCTTGAAAACAGCTGGAAAAGATATTAGCATGAAATATCTGGGCGTCT
ATGTTTTGCAAGTTGCAAAAGATTCGACTTTTAAGGGAATTTTGAATATTGCGGACACGGTGACGGGAGTTAATGACAAG
ACTTTTGACAGTTCAGAAGAATTAGTGAAATATGTTAATTCGCAGAAATTAGGAGATAAGGTTAAGGTCACTTACCAGGA
AGATGGCCAAGAAAAATCAGCGATTGGAAAGATTATTAAGCTAGAAAATGGTAAAAACGGAATCGGTATTAGCTTAATCG
ATAGAACAGAAGTCACTAGTAACATTCCGATTGAATTTACTACAGAAGGCATTGGAGGACCTAGTGCGGGTCTCATGTTT
AGCTTGTCAATTTATACACAACTTGCAGATCCAACCTTACGAGATGGACGTGTGATTGCAGGTACAGGAACTATCAATCG
TGATGGAGAAGTTGGTGATATTGGTGGGATTGATAAGAAAGTCGTCTCAGCTGCTAAAAGTGGTGCCAGCATCTTCTTTG
CTCCCAATAATCCTGTAACAAAAGAAATGAAAAAAATCGATCCAAAAGCAAAGACAAACTATGAAACTGCAGTTGAGGCT
GCTAAAAAGATTAAAACAGATATGAAAATTGTTCCTGTTAAAACCTTACAGGATGCCATTGATTATCTTAAGAACAATAA
ATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (129-193)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-315)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	61.85	99.712	0.617