Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   DQM57_RS05050 Genome accession   NZ_LS483369
Coordinates   954703..955164 (+) Length   153 a.a.
NCBI ID   WP_003674699.1    Uniprot ID   A0A7T3EV00
Organism   Neisseria cinerea strain NCTC10294     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 949703..960164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM57_RS05030 (NCTC10294_00961) - 950997..951206 (-) 210 WP_111727173.1 4-oxalocrotonate tautomerase family protein -
  DQM57_RS05035 (NCTC10294_00962) - 951396..952202 (+) 807 WP_111727174.1 DUF4198 domain-containing protein -
  DQM57_RS05040 (NCTC10294_00963) - 952262..953527 (-) 1266 WP_111727655.1 Glu/Leu/Phe/Val dehydrogenase -
  DQM57_RS05045 (NCTC10294_00964) - 953924..954631 (+) 708 WP_111727175.1 phosphoglycolate phosphatase -
  DQM57_RS05050 (NCTC10294_00965) recX 954703..955164 (+) 462 WP_003674699.1 recombination regulator RecX Regulator
  DQM57_RS05055 (NCTC10294_00966) - 955238..955399 (+) 162 WP_003674702.1 hypothetical protein -
  DQM57_RS05065 (NCTC10294_00967) - 955552..956034 (+) 483 WP_003674703.1 acyl-CoA thioesterase -
  DQM57_RS05070 (NCTC10294_00968) - 956154..957167 (-) 1014 WP_111727657.1 peptidoglycan DD-metalloendopeptidase family protein -
  DQM57_RS05075 (NCTC10294_00969) surE 957270..958016 (-) 747 WP_111727176.1 5'/3'-nucleotidase SurE -
  DQM57_RS05080 (NCTC10294_00970) - 958030..959586 (-) 1557 WP_003674714.1 TerC family protein -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17821.16 Da        Isoelectric Point: 9.7036

>NTDB_id=1138956 DQM57_RS05050 WP_003674699.1 954703..955164(+) (recX) [Neisseria cinerea strain NCTC10294]
MKAQKSLRARAMDILSRQEVSRLGLKRKLAPHAESEEELENVLNEFSERNWQSDLRYAEAYIHSKSRKHGSLRLKQALAQ
QGIDEETSRKLLPDRLSEKQTAMDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1138956 DQM57_RS05050 WP_003674699.1 954703..955164(+) (recX) [Neisseria cinerea strain NCTC10294]
ATGAAAGCGCAAAAATCACTCCGAGCCCGAGCGATGGACATCCTGTCCCGTCAGGAAGTCAGCCGTCTCGGGCTGAAGCG
CAAGCTCGCTCCCCATGCCGAAAGCGAAGAAGAGTTGGAAAACGTCTTGAACGAATTTTCCGAACGCAACTGGCAGTCGG
ATTTACGCTATGCAGAAGCCTATATCCACAGCAAAAGCCGTAAACACGGCTCCCTGCGCCTGAAACAGGCCCTGGCTCAA
CAGGGCATAGACGAAGAGACAAGCCGAAAGCTGCTTCCGGACAGGTTGAGCGAAAAACAGACCGCCATGGACGTGTTGCG
TAAAAAATTCAAACATCCGGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACATGCCTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7T3EV00

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

90.196

100

0.902


Multiple sequence alignment