Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   DQM57_RS00850 Genome accession   NZ_LS483369
Coordinates   155941..157983 (+) Length   680 a.a.
NCBI ID   WP_111726324.1    Uniprot ID   A0A7T3BLH2
Organism   Neisseria cinerea strain NCTC10294     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 150941..162983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM57_RS00825 (NCTC10294_00161) - 151365..152033 (+) 669 WP_111726322.1 response regulator transcription factor -
  DQM57_RS00830 (NCTC10294_00162) - 152136..153383 (+) 1248 WP_111727597.1 HAMP domain-containing sensor histidine kinase -
  DQM57_RS00835 (NCTC10294_00163) rng 153422..154915 (-) 1494 WP_107959823.1 ribonuclease G -
  DQM57_RS00840 (NCTC10294_00165) grxC 155129..155386 (+) 258 WP_039854192.1 glutaredoxin 3 -
  DQM57_RS00845 (NCTC10294_00166) secB 155409..155843 (+) 435 WP_003676334.1 protein-export chaperone SecB -
  DQM57_RS00850 (NCTC10294_00167) recG 155941..157983 (+) 2043 WP_111726324.1 ATP-dependent DNA helicase RecG Machinery gene
  DQM57_RS00855 (NCTC10294_00168) - 158142..159917 (-) 1776 WP_111726326.1 extracellular solute-binding protein -
  DQM57_RS10015 - 160190..160535 (+) 346 Protein_159 winged helix domain-containing protein -
  DQM57_RS09840 (NCTC10294_00169) - 160544..160771 (+) 228 WP_167395581.1 hypothetical protein -
  DQM57_RS00880 - 161130..161436 (+) 307 Protein_161 winged helix domain-containing protein -
  DQM57_RS00895 (NCTC10294_00171) - 161869..162564 (+) 696 Protein_162 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 75176.05 Da        Isoelectric Point: 6.8919

>NTDB_id=1138936 DQM57_RS00850 WP_111726324.1 155941..157983(+) (recG) [Neisseria cinerea strain NCTC10294]
MMTPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPISVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQMAAGKRIRAVGEIKHGFYGDEMIHPKIRDAESGGLAESLTPIYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
PALGGDGTLTNALRHALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLADGTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRL
ALKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRTEVEGFVLNICRKGQQAYWVCPLI
EESETLQLQTATETLEQLQAALPELNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPMLIEQNPEIVEAHLARWLSSREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=1138936 DQM57_RS00850 WP_111726324.1 155941..157983(+) (recG) [Neisseria cinerea strain NCTC10294]
ATGATGACGCCAGAAACCCAAAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCATGGGATTTGGTTTTGCACTTGCCGCTGCGTTACGAGGACGAGACGCACATCATGCCGATTAAGGATGCGCCGATCA
GCGTGCCGTGTCAGGTTGAGGGCGAAGTCATCCATCAGGAAGTAACGTTCAAACCGCGTAAGCAGCTTATCGTCCAAATC
GCCGACGGTTCCGGCAGTGTCCTTTTTCTGCGTTTCATCCACTTTTACGCCAGCCATCAGAAGCAGATGGCAGCAGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGGTTTTACGGCGACGAGATGATTCATCCCAAAATACGCGATGCCGAGA
GCGGCGGTTTGGCGGAAAGCCTCACGCCGATTTATCCGACCGTAAACGGCCTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCCTTGGACGTTACGCCGTTGCACGATACCTTGCCTGATGCTTTATTAGGCCGTCTGAAACTGCCACACCTTGC
CGAAAGCCTTCGTCTTCTGCATTCACCGCCGCCTAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGACGAACTGTTGGCGCAACAGTTGTCCATGCGGCTGGCGCGACAGAAGCGCGTCAGCGGCACGGCG
CCAGCATTGGGCGGCGACGGTACGTTGACTAATGCACTGCGCCACGCTTTACCGTTTGCCCTGACCGATGCCCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTACAAGGCGATGTCGGCAGCGGCA
AAACCATTGTGGCGGCTTTGTCTGCGCTGACCGCTATTGAATCCGGCGCGCAGGTGGCTGTAATGGCGCCGACTGAAATC
CTTGCCGAACAGCATTTCATCAAGTTCAAACAATGGCTTGAGCCGTTGGGTCTCGAAGTCGTCTGGCTTTCCGGCAGCCA
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCACTGTCAAAATCGCTGTCGGCACGCACGCCCTGT
TTTCAGACGACGTCGAGTTCCAAAATCTCGGCTTGGTGATTGTGGACGAACAACACCGCTTCGGCGTCGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGACGTCCACCAGCTGATGATGTCTGCCACGCCCATCCCGCGTACGCTCGCCATGAGTTT
CTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACCCCGATTAAAACCCGTCTCGTCAACAACG
TCCGCCGCACCGAAGTCGAAGGCTTCGTCCTCAACATCTGTCGCAAAGGGCAGCAGGCATACTGGGTCTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCACTGAAACCCTCGAGCAGCTTCAGGCGGCATTGCCCGAACTCAACAT
CGGCTTGGTACACGGGCGCATGAAGGCTGCCGAAAAAGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGGCGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGAGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATTGCCCGTCAAGACC
TTAACATCCGCGGACCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTCCCCATGCTGCGCTTCGCCAACCTTGAAGAA
GACCTGCACCTCTTGGAACAAGCGCGCGAAATCGCCCCCATGTTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGATGGCTTTCCAGCAGGGAAGGGTATTTGGGCGTGTAG

Domains

Predicted by InterproScan.

RecG wedge domain (RecG_wedge)

(15-164)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(262-419)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3BLH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

94.118

100

0.941

Multiple sequence alignment