Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DQM57_RS00760 | Genome accession | NZ_LS483369 |
| Coordinates | 135914..136513 (-) | Length | 199 a.a. |
| NCBI ID | WP_108043408.1 | Uniprot ID | A0A7T3EVG8 |
| Organism | Neisseria cinerea strain NCTC10294 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 130914..141513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM57_RS00740 (NCTC10294_00145) | - | 131798..132310 (-) | 513 | WP_111726304.1 | shikimate kinase | - |
| DQM57_RS00745 (NCTC10294_00146) | - | 132463..134217 (-) | 1755 | Protein_136 | type IV pilus secretin PilQ | - |
| DQM57_RS10045 | - | 134257..134658 (-) | 402 | Protein_137 | AMIN domain-containing protein | - |
| DQM57_RS00750 (NCTC10294_00147) | pilP | 134676..135227 (-) | 552 | WP_108043410.1 | pilus assembly protein PilP | Machinery gene |
| DQM57_RS00755 (NCTC10294_00148) | - | 135245..135913 (-) | 669 | WP_111726308.1 | type 4a pilus biogenesis protein PilO | - |
| DQM57_RS00760 (NCTC10294_00149) | pilN | 135914..136513 (-) | 600 | WP_108043408.1 | PilN domain-containing protein | Machinery gene |
| DQM57_RS00765 (NCTC10294_00150) | pilM | 136516..137625 (-) | 1110 | WP_107959811.1 | type IV pilus biogenesis protein PilM | - |
| DQM57_RS00770 (NCTC10294_00151) | - | 137778..140174 (+) | 2397 | WP_111726310.1 | penicillin-binding protein 1A | - |
| DQM57_RS00775 (NCTC10294_00152) | yihA | 140294..140923 (-) | 630 | WP_039854198.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22652.83 Da Isoelectric Point: 8.3192
>NTDB_id=1138935 DQM57_RS00760 WP_108043408.1 135914..136513(-) (pilN) [Neisseria cinerea strain NCTC10294]
MNNLIKINLLPYREEINRRKQQQFKTLMYGAVLIGFASIAGAYLFIDNMTNNQLERNTLLETSIAHLDSELTEIQKLKQE
KDAFLLKKNKIEELQLKRLQAAKILDSLNETIPDNTYLTSLEAVTADSYRLNGRTSSDNRVANMMRAMPNTGIFNQPELL
SIKKNNSYQEFTLQATLNPIVKASETAKNPAPENTQETN
MNNLIKINLLPYREEINRRKQQQFKTLMYGAVLIGFASIAGAYLFIDNMTNNQLERNTLLETSIAHLDSELTEIQKLKQE
KDAFLLKKNKIEELQLKRLQAAKILDSLNETIPDNTYLTSLEAVTADSYRLNGRTSSDNRVANMMRAMPNTGIFNQPELL
SIKKNNSYQEFTLQATLNPIVKASETAKNPAPENTQETN
Nucleotide
Download Length: 600 bp
>NTDB_id=1138935 DQM57_RS00760 WP_108043408.1 135914..136513(-) (pilN) [Neisseria cinerea strain NCTC10294]
ATGAATAATCTAATTAAAATTAACCTTCTTCCCTACAGGGAGGAAATCAACAGGCGTAAACAGCAACAATTCAAAACACT
TATGTATGGTGCCGTATTAATTGGCTTCGCTTCCATTGCGGGGGCTTACCTGTTTATTGACAACATGACCAATAACCAGC
TGGAGAGGAATACCCTTCTAGAAACCTCTATCGCGCACTTAGACAGTGAATTGACTGAAATCCAAAAACTAAAACAAGAG
AAAGATGCTTTCCTGCTTAAGAAAAATAAAATTGAGGAGCTTCAACTCAAACGCCTCCAAGCAGCAAAAATCCTTGACAG
TCTAAACGAAACCATCCCTGACAATACCTATCTGACTTCACTGGAGGCCGTCACTGCCGACTCTTACCGACTGAACGGCA
GAACGTCCAGTGACAACCGTGTTGCCAATATGATGAGGGCTATGCCGAATACAGGTATATTTAACCAACCGGAATTGTTA
AGTATTAAGAAAAACAATTCATACCAAGAATTTACTCTGCAAGCAACATTAAACCCCATCGTAAAGGCTTCTGAGACTGC
AAAGAACCCTGCTCCGGAAAATACACAGGAGACAAACTAA
ATGAATAATCTAATTAAAATTAACCTTCTTCCCTACAGGGAGGAAATCAACAGGCGTAAACAGCAACAATTCAAAACACT
TATGTATGGTGCCGTATTAATTGGCTTCGCTTCCATTGCGGGGGCTTACCTGTTTATTGACAACATGACCAATAACCAGC
TGGAGAGGAATACCCTTCTAGAAACCTCTATCGCGCACTTAGACAGTGAATTGACTGAAATCCAAAAACTAAAACAAGAG
AAAGATGCTTTCCTGCTTAAGAAAAATAAAATTGAGGAGCTTCAACTCAAACGCCTCCAAGCAGCAAAAATCCTTGACAG
TCTAAACGAAACCATCCCTGACAATACCTATCTGACTTCACTGGAGGCCGTCACTGCCGACTCTTACCGACTGAACGGCA
GAACGTCCAGTGACAACCGTGTTGCCAATATGATGAGGGCTATGCCGAATACAGGTATATTTAACCAACCGGAATTGTTA
AGTATTAAGAAAAACAATTCATACCAAGAATTTACTCTGCAAGCAACATTAAACCCCATCGTAAAGGCTTCTGAGACTGC
AAAGAACCCTGCTCCGGAAAATACACAGGAGACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
84.422 |
100 |
0.844 |