Detailed information NTG0113880

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: Q426_RS00325
• Genome accession: NZ_CP006770
• Coordinates: 72845..73768 (+)
• Length: 307 a.a.
• NCBI ID: WP_014623461.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus CY
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 67845..78768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q426_RS00310 (Q426_00335)	amiC	69348..70847 (+)	1500	WP_014623463.1	ABC transporter permease	Regulator
Q426_RS00315 (Q426_00340)	amiD	70847..71773 (+)	927	WP_014623462.1	oligopeptide ABC transporter permease OppC	Regulator
Q426_RS00320 (Q426_00345)	amiE	71782..72852 (+)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
Q426_RS00325 (Q426_00350)	amiF	72845..73768 (+)	924	WP_014623461.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34700.92 Da
• Isoelectric Point: 6.9308

>NTDB_id=113880 Q426_RS00325 WP_014623461.1 72845..73768(+) (amiF) [Streptococcus equi subsp. zooepidemicus CY]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIISLNETSSGEIRYDGKIINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEDERKEKIKQMMSEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKIQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERQKKLVVYHPEQHDYSVDKPSMVEIKPNHFVWANQAEAERYRKEL

Nucleotide

• Length: 924 bp

>NTDB_id=113880 Q426_RS00325 WP_014623461.1 72845..73768(+) (amiF) [Streptococcus equi subsp. zooepidemicus CY]
ATGTCTGAAAAATTAGTTGAAGTAAAAGACCTGGAGATTTCCTTTGGAGAGGGAAAGAAAAAGTTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAATAAAGGAGAAACCTTTTCTCTTGTTGGAGAATCAGGCAGCGGAAAGACAACAATAGGTCGTG
CTATCATTAGCTTAAATGAAACAAGCTCAGGCGAAATCCGCTACGACGGTAAGATTATTAATGGTAAAAAATCAAAATCT
GAAGCTAATGAACTGATTAGAAAAATCCAAATGATTTTTCAAGACCCAGCAGCCAGCCTGAATGAGCGTGCAACGGTTGA
TTATATCATCTCAGAAGGCCTTTATAATTTTAACCTATTCAAGACAGAAGATGAACGTAAAGAAAAAATTAAACAGATGA
TGTCAGAGGTGGGCTTGCTTGCAGAGCACCTGACACGCTACCCTCATGAGTTTTCAGGTGGGCAGCGTCAGCGTATAGGC
ATTGCAAGAGCACTTGTGATGGATCCAGAGTTTGTCATTGCTGATGAGCCAATTTCAGCTCTTGATGTATCTGTTCGTGC
CCAAGTCTTGAATCTGTTGAAGAAAATACAGGCTGAAAAAGGCTTGACCTATTTATTCATTGCTCATGATTTATCAGTTG
TGCGTTTTATTTCAGATCGTATTGCTGTTATTCACAAAGGAGTAATTGTTGAAGTTGCTGAAACAGAAGAGCTTTTTGTT
AATCCTGTTCACCCTTATACCAAATCTCTGTTGTCAGCGGTACCAATTCCAGATCCCATTTTAGAGCGTCAAAAGAAATT
GGTGGTCTATCATCCAGAGCAGCATGACTATTCTGTTGACAAGCCATCAATGGTGGAAATCAAACCAAATCACTTCGTCT
GGGCTAACCAGGCAGAAGCGGAGCGTTACCGTAAAGAGCTTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.68	99.674	0.824
amiF	Streptococcus thermophilus LMD-9	82.353	99.674	0.821
amiF	Streptococcus salivarius strain HSISS4	82.353	99.674	0.821