Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | DQM60_RS07125 | Genome accession | NZ_LS483366 |
| Coordinates | 1549915..1552185 (+) | Length | 756 a.a. |
| NCBI ID | WP_084871470.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain NCTC7366 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1544915..1557185
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM60_RS07095 (NCTC7366_01428) | - | 1545270..1545746 (-) | 477 | WP_004182941.1 | ferrous iron transport protein A | - |
| DQM60_RS07100 (NCTC7366_01429) | - | 1545918..1546652 (-) | 735 | WP_013990918.1 | amino acid ABC transporter ATP-binding protein | - |
| DQM60_RS07105 (NCTC7366_01430) | - | 1546652..1547332 (-) | 681 | WP_002886081.1 | amino acid ABC transporter permease | - |
| DQM60_RS07110 (NCTC7366_01431) | tnpA | 1547715..1548188 (-) | 474 | WP_013990678.1 | IS200/IS605 family transposase | - |
| DQM60_RS07115 (NCTC7366_01432) | - | 1548393..1548623 (-) | 231 | WP_002885970.1 | DUF1797 family protein | - |
| DQM60_RS07120 (NCTC7366_01433) | argF | 1548692..1549672 (-) | 981 | WP_004182944.1 | ornithine carbamoyltransferase | - |
| DQM60_RS07125 (NCTC7366_01434) | clpE | 1549915..1552185 (+) | 2271 | WP_084871470.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQM60_RS07130 (NCTC7366_01435) | - | 1552328..1552786 (+) | 459 | WP_013990921.1 | NUDIX hydrolase | - |
| DQM60_RS07135 (NCTC7366_01436) | - | 1552796..1553098 (+) | 303 | WP_002885967.1 | DUF1827 family protein | - |
| DQM60_RS07140 (NCTC7366_01437) | - | 1553144..1554106 (-) | 963 | WP_111686638.1 | Gfo/Idh/MocA family protein | - |
| DQM60_RS07145 (NCTC7366_01438) | - | 1554185..1554868 (-) | 684 | WP_013990923.1 | TVP38/TMEM64 family protein | - |
| DQM60_RS07150 (NCTC7366_01439) | - | 1554951..1555571 (-) | 621 | WP_002885892.1 | DUF3862 domain-containing protein | - |
Sequence
Protein
Download Length: 756 a.a. Molecular weight: 83960.99 Da Isoelectric Point: 5.0102
>NTDB_id=1138787 DQM60_RS07125 WP_084871470.1 1549915..1552185(+) (clpE) [Streptococcus salivarius strain NCTC7366]
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNQGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDSIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKATQKAETSKETD
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNQGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDSIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKATQKAETSKETD
Nucleotide
Download Length: 2271 bp
>NTDB_id=1138787 DQM60_RS07125 WP_084871470.1 1549915..1552185(+) (clpE) [Streptococcus salivarius strain NCTC7366]
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAATGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGACCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCCA
ACTTCTTCGACGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGAGGTAACCAAGGAAACGGTGGCAATACACAAGGGCCAGGCCGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATCAACATCACTGACATCGCTCGTCGCGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAAAACAACCCTGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTCGTTGAAGGCCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATCCGTCTTGATGTGGTCAGCCTGGTTCAAGGGACTGGTATCCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTGATCCTATTTATTGATGAAATCCATGAAATTGTAGGAGCTGGTAATGCTGGT
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCCCTTGCTCGTGGGGAACTTCAACTGGTCGGAGCAACAACACT
CAACGAATACCGCATCATCGAAAAAGATGCTGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATTCAACCTAAATATCAAGACTACCACCACGTCAAATATACGGACGAAGCGATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGTTTCTTGCCAGACAAGGCCATTGACCTTCTCGATGAAGC
TGGTTCTAAGATGAACTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCTAAATACAAGGAAATGCAA
AAACAAACCATCAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
TCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCAGCAGTTGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCTATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGACATGTCAGAATACATGGAAAAACATGCTGTCGCTAAATTGGTCGGTGCCCCTCCAGGAT
ACGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCATATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGACGTTCTTCACATGTTCCTCCAAGTTCTTGACGACGGTCGCTTGACTGATGGTCAAGGGCGAAC
TGTAAGTTTCAAGGATTCCATCATCATCATGACTTCAAATGCTGGTACAGGTAAAGTTGAAGCTAGCGTTGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTGCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTCATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAAGAAAATCTCCTTACTATCGTTGACCTCATGCTTGATAATGTCAACCAACG
CTTGGCTAATAACGGTATCCACCTCAGTGTAACTGAGAAAGTTAAGGAAAAATTGGTTGACCTTGGTTACGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGACCATATTGAAGATGCTATTACAGACTTCTACCTTGAAAATCCAAAT
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGCCACATCACCATTAAGTCTGCTAAAAAAGCTGAAAAAGCTACTCA
GAAAGCTGAGACATCAAAAGAAACTGATTAA
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAATGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGACCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCCA
ACTTCTTCGACGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGAGGTAACCAAGGAAACGGTGGCAATACACAAGGGCCAGGCCGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATCAACATCACTGACATCGCTCGTCGCGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAAAACAACCCTGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTCGTTGAAGGCCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATCCGTCTTGATGTGGTCAGCCTGGTTCAAGGGACTGGTATCCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTGATCCTATTTATTGATGAAATCCATGAAATTGTAGGAGCTGGTAATGCTGGT
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCCCTTGCTCGTGGGGAACTTCAACTGGTCGGAGCAACAACACT
CAACGAATACCGCATCATCGAAAAAGATGCTGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATTCAACCTAAATATCAAGACTACCACCACGTCAAATATACGGACGAAGCGATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGTTTCTTGCCAGACAAGGCCATTGACCTTCTCGATGAAGC
TGGTTCTAAGATGAACTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCTAAATACAAGGAAATGCAA
AAACAAACCATCAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
TCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCAGCAGTTGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCTATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGACATGTCAGAATACATGGAAAAACATGCTGTCGCTAAATTGGTCGGTGCCCCTCCAGGAT
ACGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCATATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGACGTTCTTCACATGTTCCTCCAAGTTCTTGACGACGGTCGCTTGACTGATGGTCAAGGGCGAAC
TGTAAGTTTCAAGGATTCCATCATCATCATGACTTCAAATGCTGGTACAGGTAAAGTTGAAGCTAGCGTTGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTGCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTCATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAAGAAAATCTCCTTACTATCGTTGACCTCATGCTTGATAATGTCAACCAACG
CTTGGCTAATAACGGTATCCACCTCAGTGTAACTGAGAAAGTTAAGGAAAAATTGGTTGACCTTGGTTACGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGACCATATTGAAGATGCTATTACAGACTTCTACCTTGAAAATCCAAAT
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGCCACATCACCATTAAGTCTGCTAAAAAAGCTGAAAAAGCTACTCA
GAAAGCTGAGACATCAAAAGAAACTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
85.638 |
99.471 |
0.852 |
| clpE | Streptococcus pneumoniae Rx1 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae D39 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae R6 |
83.267 |
99.603 |
0.829 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.267 |
99.603 |
0.829 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
78.99 |
96.958 |
0.766 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.698 |
85.714 |
0.443 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.884 |
86.772 |
0.398 |
| clpC | Streptococcus pneumoniae Rx1 |
47.2 |
82.672 |
0.39 |
| clpC | Streptococcus pneumoniae D39 |
47.2 |
82.672 |
0.39 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.04 |
82.672 |
0.389 |
| clpC | Streptococcus thermophilus LMD-9 |
46.88 |
82.672 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.56 |
82.672 |
0.385 |
| clpC | Streptococcus mutans UA159 |
46.326 |
82.804 |
0.384 |