Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   DQM55_RS09380 Genome accession   NZ_LS483364
Coordinates   1876184..1877950 (-) Length   588 a.a.
NCBI ID   WP_032908920.1    Uniprot ID   A0A2X3Y110
Organism   Streptococcus sanguinis strain NCTC11086     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1871184..1882950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS09365 (NCTC11086_01904) cbiB 1871828..1872778 (-) 951 WP_111676405.1 adenosylcobinamide-phosphate synthase CbiB -
  DQM55_RS09370 (NCTC11086_01905) - 1872780..1874138 (-) 1359 WP_111676407.1 cobyrinate a,c-diamide synthase -
  DQM55_RS09375 (NCTC11086_01906) rcrQ 1874437..1876194 (-) 1758 WP_111676408.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS09380 (NCTC11086_01907) rcrP 1876184..1877950 (-) 1767 WP_032908920.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS09385 (NCTC11086_01908) - 1877943..1878401 (-) 459 WP_111676410.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQM55_RS09390 (NCTC11086_01909) - 1878555..1878965 (-) 411 WP_111676412.1 peptide deformylase -
  DQM55_RS09395 (NCTC11086_01910) scrK 1879012..1879911 (-) 900 WP_002925822.1 fructokinase ScrK -
  DQM55_RS09400 (NCTC11086_01911) - 1880071..1882035 (-) 1965 WP_111676414.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65204.53 Da        Isoelectric Point: 5.1882

>NTDB_id=1138686 DQM55_RS09380 WP_032908920.1 1876184..1877950(-) (rcrP) [Streptococcus sanguinis strain NCTC11086]
MFKLFKRLTAREVSMIVLSVLFTFLTVYLELEVPTYISTITELLQTPGTGLADLWEPGLKMIGLSFASLLSAIVVGFFAA
RIAASFTQSLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQTLITMGLQVVTRGPIMAIWAMTKIIGKSENWLTA
VLIAVLVNILLTVVLVTLAFPKQSVAQRLVDKLNSVTRESLTGIRVVRAYNAEDYQDEKFAAANDEVTRLNLFIGRLMAM
MNPVMMGISSGLTLAIYWIGAYLIQEAGLQERLPLFSDMVVFMSYAMQIVIGFLLMGALFIVLPRTIVSAGRINEVLDLH
SSITSPEHPKAAADSKGEVVFRDVSFRYSKNSEAVIEHVSFTTQAGDTVAFIGSTGSGKSTLVNLIPRFYDVTEGEILVD
GVNVQDYQLEDLHNKVGYIPQKAVLFSGDIESNLDFGQSKESPLDEQKMWEALDLAQAKPFVQEKEKGLKAEVAQSGTNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAERTQDMTKLIVAQRISTIMDADQILVLDAGKVVGQGT
HRELLASNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1138686 DQM55_RS09380 WP_032908920.1 1876184..1877950(-) (rcrP) [Streptococcus sanguinis strain NCTC11086]
ATGTTTAAGTTATTTAAACGGCTGACGGCAAGGGAAGTGAGCATGATTGTTCTCAGTGTGCTCTTCACCTTCCTGACGGT
ATATTTGGAATTAGAAGTTCCGACCTATATTTCGACGATTACAGAGCTATTGCAAACGCCGGGGACTGGTTTGGCGGATC
TGTGGGAGCCCGGTCTGAAAATGATCGGCCTGTCTTTTGCTAGCTTGTTGTCAGCTATTGTGGTTGGCTTTTTTGCAGCT
CGTATAGCAGCTAGCTTTACCCAGAGTTTGCGGAGCGATATTTTCAACCGTGTGCTAGACTATTCGCAGACGGAGATTAA
GAAATTTTCAATTCCTAGTTTGCTAACTCGGACAACGAATGACATTACCCAGGTACAGACCTTAATTACCATGGGACTGC
AGGTAGTGACCAGGGGACCGATTATGGCGATTTGGGCCATGACTAAGATTATCGGTAAGTCTGAGAACTGGCTGACAGCT
GTTCTCATTGCCGTTCTTGTTAATATCCTGCTGACAGTAGTTTTGGTTACACTGGCCTTTCCCAAGCAGTCAGTGGCGCA
GCGCTTGGTCGATAAGCTAAACAGTGTCACTAGAGAGAGTCTGACTGGGATTCGCGTGGTCCGGGCTTATAATGCTGAGG
ATTATCAGGATGAGAAATTTGCGGCAGCTAATGATGAAGTAACTCGACTCAATCTTTTCATCGGTCGTCTGATGGCCATG
ATGAACCCAGTTATGATGGGGATTTCCAGCGGTTTGACACTGGCTATTTACTGGATTGGTGCTTATTTGATTCAGGAGGC
TGGACTGCAGGAGCGTCTCCCACTCTTCAGTGATATGGTCGTCTTTATGTCCTATGCTATGCAGATTGTGATTGGATTCT
TGCTCATGGGGGCACTCTTCATCGTCCTTCCTCGGACCATTGTATCGGCTGGCCGGATTAATGAAGTACTGGATCTGCAT
TCTTCTATCACCAGTCCAGAACATCCTAAGGCAGCAGCAGATAGTAAGGGCGAGGTGGTCTTTCGAGATGTGTCCTTCCG
CTATTCCAAGAATTCAGAAGCAGTCATTGAGCATGTCAGCTTTACAACTCAGGCTGGTGATACCGTGGCCTTTATCGGTT
CAACCGGTTCAGGGAAATCCACTCTTGTCAATCTCATCCCTCGTTTCTACGATGTGACTGAAGGAGAGATTCTGGTAGAT
GGTGTCAATGTTCAAGATTACCAGTTGGAAGACTTGCATAATAAGGTCGGCTACATCCCGCAAAAGGCTGTGCTTTTCTC
TGGTGATATTGAGAGCAATCTGGACTTCGGTCAAAGCAAAGAAAGCCCGCTGGATGAGCAGAAAATGTGGGAGGCTCTTG
ACCTAGCACAGGCTAAGCCCTTTGTCCAAGAGAAGGAAAAGGGGCTGAAAGCTGAAGTGGCTCAAAGCGGAACCAACTTC
TCTGGTGGCCAGCGTCAGCGTTTGGCCATTGCCAGAGCCTTGGCTCGTAAGCCAGAAATCCTCATCTTTGATGATTCCTT
CTCAGCCCTAGACTATAAGACAGACCGCATTTTGCGCAAGGAACTGGCTGAGCGGACGCAGGATATGACCAAGCTGATCG
TAGCACAGCGGATTTCTACCATCATGGATGCGGATCAAATCTTGGTCTTGGATGCTGGTAAGGTAGTCGGTCAAGGTACT
CACCGAGAACTTTTGGCCAGCAACGAAGTCTATCAAGAAATTGCTTACTCACAACTATCCAAGGAGGAATTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-290)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3Y110

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.5

100

0.699

Multiple sequence alignment