Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DQM55_RS09375 Genome accession   NZ_LS483364
Coordinates   1874437..1876194 (-) Length   585 a.a.
NCBI ID   WP_111676408.1    Uniprot ID   A0A2X3YSN7
Organism   Streptococcus sanguinis strain NCTC11086     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1869437..1881194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS09355 (NCTC11086_01902) - 1870415..1871119 (-) 705 WP_111676403.1 cobalt-precorrin-8 methylmutase -
  DQM55_RS09360 (NCTC11086_01903) - 1871120..1871818 (-) 699 WP_002901147.1 cobalt-precorrin-8 methylmutase -
  DQM55_RS09365 (NCTC11086_01904) cbiB 1871828..1872778 (-) 951 WP_111676405.1 adenosylcobinamide-phosphate synthase CbiB -
  DQM55_RS09370 (NCTC11086_01905) - 1872780..1874138 (-) 1359 WP_111676407.1 cobyrinate a,c-diamide synthase -
  DQM55_RS09375 (NCTC11086_01906) rcrQ 1874437..1876194 (-) 1758 WP_111676408.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS09380 (NCTC11086_01907) rcrP 1876184..1877950 (-) 1767 WP_032908920.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS09385 (NCTC11086_01908) - 1877943..1878401 (-) 459 WP_111676410.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQM55_RS09390 (NCTC11086_01909) - 1878555..1878965 (-) 411 WP_111676412.1 peptide deformylase -
  DQM55_RS09395 (NCTC11086_01910) scrK 1879012..1879911 (-) 900 WP_002925822.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64403.33 Da        Isoelectric Point: 4.8798

>NTDB_id=1138685 DQM55_RS09375 WP_111676408.1 1874437..1876194(-) (rcrQ) [Streptococcus sanguinis strain NCTC11086]
MENKKPSLFSQIRPYLKGFQLPLALAFVGAVLSNIITVYGPNKLKEITNLISDGLATSIDLKAVSEIALLLTVLYAVGAL
LNYGQSFIISTVIQYFSKRLRTAIAEKINKLPLGYFDGHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATVVGFVFVGLIMGKSQGYFTAQQNDLAAVNGYVEEMYSGHNVVTSYNAIEQSKERFAVLNHNLYNS
IWKSQFISGMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGITVLQQAGAALVRVLE
FLAEPEMEDDQHKEQQLAAVKGDVAFEDVFFGYKPDQTIIHDFSAQAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ISIDGIDIKDMKRSEVHDAFSMVLQETWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQGYDTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDELMEQNGFYADLYNSQFVEEDAG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1138685 DQM55_RS09375 WP_111676408.1 1874437..1876194(-) (rcrQ) [Streptococcus sanguinis strain NCTC11086]
ATGGAAAATAAGAAGCCTTCATTATTTAGCCAGATAAGGCCTTATCTCAAAGGCTTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAACATTATTACGGTCTATGGGCCAAATAAATTAAAAGAAATTACCAACCTCATCTCTGATG
GTCTGGCTACTAGCATTGATTTAAAAGCTGTGTCTGAGATTGCCCTTCTGCTGACCGTGCTCTATGCAGTCGGAGCCCTG
CTCAACTATGGTCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCCAAGCGGCTGCGGACGGCCATTGCAGAGAA
GATAAACAAGCTGCCGTTGGGCTATTTTGACGGTCATTCTCAGGGGGATACTCTGTCGCGCGTGACCAATGACGTGGATA
CGGTCGGCCAATCCCTCAACCAGAGTCTGGGGAATGTTATCTCTGCCAGCTTGCTCTTGGTGGCTGTGGTCTTGACCATG
TTCTTCATGAACTGGATCTTGGCCTTGGTAACCATCTTGGCTACTGTAGTCGGCTTTGTCTTTGTCGGCCTCATCATGGG
CAAGTCTCAGGGCTATTTCACCGCCCAGCAAAACGATCTGGCGGCTGTCAACGGTTATGTAGAGGAAATGTACTCCGGTC
ATAATGTCGTTACCAGCTATAATGCTATTGAGCAGTCTAAGGAGCGCTTTGCAGTTCTCAATCACAATCTCTATAACAGT
ATTTGGAAGTCTCAATTTATCTCTGGCATGATGATGCCGCTCATGTTCTTTACGGGGAATTTTGCTTATGTGCTGGTTAT
TTTGGTCGGTGCTGCTCTGGCGATTAACGGCTCTATTAGCATCGGAATTATCGTCGCCTTTATGGTTTATGTGCGGACCT
TCTCTCAGCCATTGTCACAGATTGCCCAAGGTATCACTGTCTTGCAGCAGGCTGGTGCAGCACTGGTTCGTGTCCTTGAA
TTTCTGGCTGAGCCTGAGATGGAAGACGACCAGCATAAAGAGCAGCAGCTTGCTGCTGTCAAGGGAGATGTCGCCTTTGA
AGATGTCTTCTTTGGCTACAAGCCAGACCAGACGATTATTCATGATTTCTCAGCCCAGGCCAAAGCCGGACAGAAGATTG
CCATTGTCGGCCCAACGGGTGCTGGTAAGACGACCATCGTTAATCTCCTTATGAAGTTCTATGAAATTGACAAGGGGCGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAGCGCTCTGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGAGAC
CTGGCTCTTTGAGGGGACGATTCGGGAGAATTTGATTTATAATCAGGAGCATGTGACAGATGAAGCAGTTGTTGCTGCAG
CGAAGGCGGTCGGTGTTCATCACTTTATCATGACTCTGCCGCAGGGCTATGATACAGTGTTGGATGATACGGTTAACTTA
TCGGTCGGTCAGAAGCAGCTATTGACAATCGCTCGTGCTCTGCTGAAAGATGCACCGCTCTTGATCTTGGATGAGGCAAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTGATTCAAAAGGCTATGGACAAACTCATGGAGGGCCGGACTTCCTTTGTCA
TTGCCCACCGCTTATCTACTATCCGTAATGCGGATCTTATCTTGGTCATGCGCGATGGAAATATCATCGAGCAGGGCAAC
CATGATGAACTCATGGAGCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAGTTTGTAGAGGAAGATGCAGGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3YSN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.863

99.829

0.697

Multiple sequence alignment