Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   DQM55_RS08570 Genome accession   NZ_LS483364
Coordinates   1726328..1727371 (-) Length   347 a.a.
NCBI ID   WP_111676199.1    Uniprot ID   A0A2X3YIH7
Organism   Streptococcus sanguinis strain NCTC11086     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1721328..1732371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS08550 trpB 1722407..1723588 (-) 1182 WP_111676191.1 tryptophan synthase subunit beta -
  DQM55_RS08555 (NCTC11086_01747) - 1723978..1724493 (-) 516 WP_111676193.1 VanZ family protein -
  DQM55_RS08560 (NCTC11086_01748) rlmN 1724480..1725568 (-) 1089 WP_111676195.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  DQM55_RS08565 (NCTC11086_01749) - 1725565..1726146 (-) 582 WP_111676197.1 YutD family protein -
  DQM55_RS08570 (NCTC11086_01750) sepM 1726328..1727371 (-) 1044 WP_111676199.1 SepM family pheromone-processing serine protease Regulator
  DQM55_RS08575 (NCTC11086_01751) coaD 1727358..1727852 (-) 495 WP_002902590.1 pantetheine-phosphate adenylyltransferase -
  DQM55_RS08580 (NCTC11086_01752) rsmD 1727842..1728390 (-) 549 WP_172454750.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  DQM55_RS08585 (NCTC11086_01753) - 1728460..1728948 (-) 489 WP_111676201.1 YcxB family protein -
  DQM55_RS08590 (NCTC11086_01754) - 1729122..1729544 (+) 423 WP_111676203.1 DUF805 domain-containing protein -
  DQM55_RS08595 (NCTC11086_01755) - 1729735..1729857 (-) 123 Protein_1618 YcxB family protein -
  DQM55_RS08600 (NCTC11086_01756) - 1730000..1730677 (+) 678 WP_111676205.1 helix-turn-helix domain-containing protein -
  DQM55_RS08605 (NCTC11086_01757) - 1730682..1732097 (+) 1416 WP_111676207.1 Y-family DNA polymerase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 37933.14 Da        Isoelectric Point: 5.0267

>NTDB_id=1138683 DQM55_RS08570 WP_111676199.1 1726328..1727371(-) (sepM) [Streptococcus sanguinis strain NCTC11086]
MKRIKKFILPTVIGVTIAFFIAALYVRLPYYIEVPGGAEDVRQVLLVDNKADKEAGSYNFVTVGVEQATFAHLVYAWLTP
FTDIYSAKDMTGGSTDEEFNRINQFYMETSQNMAKYQGLTTAGKEIKMDYLGVYVLQVADNSTFKGVLNIADTVTGVNDK
TFESSEELVKYVNSQKLGDKIKVTFQEDGQEKSATGKIIKLENGKNGIGISLIDRTEVSSSIPITFSTEGIGGPSAGLMF
SLAIYTQLADPTLRDGRDIAGTGSISREGEVGEIGGIDKKVVSAAQSGADIFFAPNNELTEEEKKLSPNGKNNYQTALET
AKKIKTDMKIVPVKTLQDAIDYLKKNK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1138683 DQM55_RS08570 WP_111676199.1 1726328..1727371(-) (sepM) [Streptococcus sanguinis strain NCTC11086]
ATGAAAAGAATTAAGAAGTTTATATTGCCGACGGTCATTGGCGTCACTATTGCCTTTTTTATAGCAGCTCTTTACGTTCG
TCTGCCTTATTATATAGAAGTTCCTGGTGGTGCCGAGGATGTTCGTCAGGTCTTGCTGGTTGATAATAAGGCCGACAAGG
AAGCGGGTTCCTACAACTTTGTGACGGTCGGAGTAGAGCAGGCAACCTTTGCTCATCTGGTCTATGCTTGGCTGACCCCT
TTTACAGATATTTATTCTGCCAAGGATATGACGGGTGGCTCCACGGATGAGGAATTTAATCGGATCAACCAGTTTTACAT
GGAAACATCGCAAAATATGGCCAAATATCAAGGGTTGACGACAGCTGGTAAAGAGATTAAAATGGACTATCTAGGGGTTT
ATGTCCTGCAGGTGGCAGATAACTCAACTTTCAAGGGAGTTCTCAATATTGCTGATACGGTAACTGGTGTCAATGACAAG
ACATTTGAAAGTTCTGAGGAGCTGGTCAAGTATGTCAACTCGCAGAAGCTTGGGGATAAAATCAAGGTAACTTTCCAAGA
GGATGGCCAGGAGAAATCGGCAACCGGCAAGATTATCAAGTTGGAGAACGGTAAGAACGGGATTGGGATTAGTCTGATAG
ACCGGACGGAAGTCAGCAGCAGTATTCCGATTACATTTTCAACTGAAGGTATTGGCGGTCCCAGTGCTGGTCTCATGTTC
AGCCTAGCCATTTATACCCAGTTGGCTGATCCGACCCTTCGTGATGGCCGCGATATTGCAGGGACCGGCAGCATCAGTCG
TGAAGGCGAAGTTGGTGAAATCGGCGGAATTGATAAGAAAGTTGTTTCAGCGGCCCAAAGCGGAGCAGATATCTTCTTTG
CACCGAACAATGAACTGACAGAGGAAGAGAAGAAGCTTTCTCCTAATGGGAAAAACAACTACCAAACGGCTTTGGAGACA
GCCAAGAAGATTAAAACGGATATGAAAATTGTTCCAGTTAAAACGCTGCAGGACGCCATTGACTATCTGAAAAAGAACAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3YIH7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

57.514

99.712

0.573


Multiple sequence alignment