Detailed information NTG1138663

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: DQM55_RS03295
• Genome accession: NZ_LS483364
• Coordinates: 631688..632401 (-)
• Length: 237 a.a.
• NCBI ID: WP_172454778.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain NCTC11086
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	619115..631273	631688..632401	flank	415

Gene organization within MGE regions

Location: 619115..632401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM55_RS03225 (NCTC11086_00641)	-	619115..620068 (+)	954	WP_111675443.1	ABC transporter ATP-binding protein	-
DQM55_RS03230 (NCTC11086_00642)	-	620055..620831 (+)	777	WP_111675444.1	ABC transporter permease	-
DQM55_RS03235 (NCTC11086_00643)	-	621432..621806 (-)	375	WP_111675445.1	hypothetical protein	-
DQM55_RS03240 (NCTC11086_00644)	-	621918..623480 (-)	1563	WP_111675446.1	beta-carotene 15,15'-monooxygenase	-
DQM55_RS03245 (NCTC11086_00645)	-	623477..624271 (-)	795	WP_011837342.1	ABC transporter ATP-binding protein	-
DQM55_RS03250 (NCTC11086_00646)	-	624346..625470 (+)	1125	WP_111675447.1	AI-2E family transporter	-
DQM55_RS03255 (NCTC11086_00647)	-	625621..626961 (+)	1341	WP_011837341.1	hemolysin family protein	-
DQM55_RS11805 (NCTC11086_00648)	-	627429..627734 (+)	306	WP_011837339.1	hypothetical protein	-
DQM55_RS03270 (NCTC11086_00649)	-	627779..628387 (+)	609	WP_011837338.1	hypothetical protein	-
DQM55_RS03275 (NCTC11086_00650)	-	628508..629116 (+)	609	WP_011837337.1	hypothetical protein	-
DQM55_RS03280 (NCTC11086_00651)	-	629107..630621 (+)	1515	WP_011837336.1	hypothetical protein	-
DQM55_RS03285 (NCTC11086_00652)	-	630630..630923 (+)	294	WP_011837335.1	hypothetical protein	-
DQM55_RS03290 (NCTC11086_00653)	-	630932..631273 (+)	342	WP_223311173.1	hypothetical protein	-
DQM55_RS03295 (NCTC11086_00654)	treR	631688..632401 (-)	714	WP_172454778.1	trehalose operon repressor	Regulator

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27754.67 Da
• Isoelectric Point: 7.3924

>NTDB_id=1138663 DQM55_RS03295 WP_172454778.1 631688..632401(-) (treR) [Streptococcus sanguinis strain NCTC11086]
MKKYKQLFKQIEKDILEERYAVGDFLPSEHQLTEDYQVSRDTVRKALALLQEEGLIEKVRGQGSKVIKHEQFDFPVSKLT
SYQEVVKQNNMQSKTNVVSLEKITVDQKLSDITGFPPYRLVWRIVRQRVVDQVASVLDIDYLDKGIVPDLTREIAEQSIY
AYLENDLKLNIAYAKKEFTIDHANDQDKILMDLGKDQQVVSVKSQVYLADGRQFQYTESRHKLDKFRFVDFAKRQKE

Nucleotide

• Length: 714 bp

>NTDB_id=1138663 DQM55_RS03295 WP_172454778.1 631688..632401(-) (treR) [Streptococcus sanguinis strain NCTC11086]
ATGAAGAAATATAAACAATTATTCAAACAAATTGAGAAAGATATTTTAGAGGAACGTTATGCAGTCGGAGACTTCTTGCC
CAGCGAACACCAGCTGACAGAAGACTACCAGGTCAGCCGCGACACTGTTCGCAAGGCTCTGGCGCTGCTGCAAGAAGAAG
GATTGATTGAAAAAGTCCGCGGACAGGGTTCCAAAGTCATCAAGCATGAACAGTTTGACTTTCCTGTGTCTAAGCTGACC
AGCTATCAAGAAGTAGTCAAGCAGAATAATATGCAGTCCAAAACCAATGTTGTCAGCTTGGAAAAGATTACCGTAGATCA
GAAACTGTCCGACATCACTGGTTTCCCTCCCTACCGACTGGTTTGGCGAATCGTCCGTCAGCGCGTTGTAGACCAAGTCG
CCTCTGTCTTAGATATTGACTATTTAGACAAGGGAATCGTCCCTGACTTGACAAGGGAAATCGCTGAGCAGTCCATTTAT
GCCTATTTGGAAAATGACTTAAAACTTAACATTGCCTATGCCAAAAAGGAATTTACCATTGACCACGCCAATGACCAAGA
CAAGATTCTCATGGACCTAGGCAAGGACCAGCAAGTCGTCTCTGTCAAGTCTCAGGTCTATCTGGCAGACGGCCGCCAGT
TTCAATATACTGAGAGCCGGCACAAGCTAGACAAATTTCGCTTTGTGGATTTTGCTAAGCGTCAGAAAGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, gntR family (GntR) (3-66)

• UTRA domain (UTRA) (90-227)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	60.338	100	0.603