Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM55_RS02515 Genome accession   NZ_LS483364
Coordinates   485280..486011 (+) Length   243 a.a.
NCBI ID   WP_172454704.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC11086     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 480280..491011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS02485 (NCTC11086_00492) - 480622..482043 (+) 1422 WP_004185530.1 NCS2 family permease -
  DQM55_RS02490 (NCTC11086_00493) tsaE 482183..482623 (+) 441 WP_004185531.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM55_RS02495 (NCTC11086_00494) - 482616..483137 (+) 522 WP_004185532.1 GNAT family N-acetyltransferase -
  DQM55_RS02500 (NCTC11086_00495) brpA 483145..484383 (+) 1239 WP_111675363.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQM55_RS02505 (NCTC11086_00496) - 484504..484791 (-) 288 WP_111675364.1 hypothetical protein -
  DQM55_RS02510 (NCTC11086_00497) - 484801..485211 (-) 411 WP_002893566.1 HIT family protein -
  DQM55_RS02515 (NCTC11086_00498) pptA 485280..486011 (+) 732 WP_172454704.1 ABC transporter ATP-binding protein Regulator
  DQM55_RS02520 (NCTC11086_00499) - 486008..487054 (+) 1047 WP_111675366.1 ABC transporter permease -
  DQM55_RS02525 (NCTC11086_00500) ccrZ 487105..487899 (+) 795 WP_111675367.1 cell cycle regulator CcrZ -
  DQM55_RS02530 (NCTC11086_00501) trmB 487896..488534 (+) 639 WP_002893561.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM55_RS02535 (NCTC11086_00502) rimP 488734..489222 (+) 489 WP_331813033.1 ribosome maturation factor RimP -
  DQM55_RS02540 (NCTC11086_00503) nusA 489282..490538 (+) 1257 WP_223323966.1 transcription termination factor NusA -
  DQM55_RS02545 (NCTC11086_00504) rnpM 490549..490845 (+) 297 WP_002893558.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27217.75 Da        Isoelectric Point: 4.8196

>NTDB_id=1138657 DQM55_RS02515 WP_172454704.1 485280..486011(+) (pptA) [Streptococcus sanguinis strain NCTC11086]
MLEIKELTGGYVNIPVLKDVSFEVGNGQLVGLIGLNGAGKSTTINEIIGLLTPYKGQIQIDGLELRTNPSDYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIEQETAFKRVDKLLEMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIQLLEEEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGSLTELRAQFQMPDASLNDIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1138657 DQM55_RS02515 WP_172454704.1 485280..486011(+) (pptA) [Streptococcus sanguinis strain NCTC11086]
ATGTTAGAAATCAAAGAGCTTACGGGCGGCTATGTTAATATCCCGGTTTTAAAGGATGTCAGCTTTGAAGTGGGCAATGG
CCAGCTGGTTGGTCTGATTGGTCTCAACGGTGCGGGCAAGTCCACGACTATCAATGAGATTATTGGTCTTCTGACGCCTT
ATAAGGGGCAAATTCAGATTGATGGACTGGAGCTGCGGACTAATCCCAGTGATTACCGCAAGAAGATCGGTTTTATTCCG
GAAACGCCTAGTCTTTACGAAGAATTGACCCTGCGCGAGCACATTGAGACGGTAGCTATGGCTTACGACATTGAGCAGGA
GACAGCTTTTAAGCGTGTGGATAAGCTATTGGAAATGTTCCGACTCAAGGAAAAACTGGATTGGTTCCCTGTTCACTTTT
CAAAAGGGATGAAGCAAAAAGTGATGATTATCTGTGCTTTTGTAGTTGATCCCAGCCTTTTTATCGTAGATGAGCCTTTT
TTAGGTCTGGATCCGGTAGCTATTGCAGACCTTATCCAGCTCTTGGAGGAGGAAAAGAAGAAGGGCAAGTCCATTCTGAT
GAGCACCCATGTTTTGGACTCTGCTGAGAAGATGTGCGATAGTTTTGTAATTCTGCACAAGGGTCAAGTGCGGGCCAAGG
GCAGCTTGACTGAGTTGCGTGCTCAATTTCAAATGCCGGATGCTAGCCTGAATGACATCTATCTAGCCCTGACAGAAGAG
GCAGCGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

98.354

0.728
  pptA Streptococcus thermophilus LMD-9

73.222

98.354

0.72

Multiple sequence alignment