Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DQM41_RS06720 Genome accession   NZ_LS483362
Coordinates   1283990..1284958 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni subsp. jejuni strain NCTC11168     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1278990..1289958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM41_RS06695 (NCTC11168_01341) cdsA 1279900..1280625 (-) 726 WP_002869557.1 phosphatidate cytidylyltransferase -
  DQM41_RS06700 (NCTC11168_01342) - 1280634..1280972 (-) 339 WP_002852397.1 hypothetical protein -
  DQM41_RS06705 (NCTC11168_01343) - 1280974..1282281 (-) 1308 WP_002864240.1 NFACT family protein -
  DQM41_RS06710 (NCTC11168_01344) mobA 1282343..1282918 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  DQM41_RS06715 (NCTC11168_01345) pldA 1282915..1283904 (+) 990 WP_002864239.1 phospholipase A -
  DQM41_RS06720 (NCTC11168_01346) ceuB 1283990..1284958 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  DQM41_RS06725 (NCTC11168_01347) ceuC 1284951..1285889 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  DQM41_RS06730 (NCTC11168_01348) ceuD 1285886..1286641 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  DQM41_RS06735 (NCTC11168_01349) ceuB 1286654..1287646 (+) 993 WP_002852385.1 enterochelin ABC transporter substrate-binding protein CeuB -
  DQM41_RS06745 (NCTC11168_01351) - 1287872..1288426 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=1138572 DQM41_RS06720 WP_002872671.1 1283990..1284958(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1138572 DQM41_RS06720 WP_002872671.1 1283990..1284958(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment