Detailed information NTG1138567

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: DQM41_RS05690
• Genome accession: NZ_LS483362
• Coordinates: 1080891..1081850 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain NCTC11168
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075891..1086850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM41_RS05670 (NCTC11168_01135)	neuC	1076460..1077575 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
DQM41_RS08930	-	1077572..1078486 (+)	915	Protein_1092	beta-1,4-N-acetylgalactosaminyltransferase	-
DQM41_RS08935	-	1078520..1079182 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
DQM41_RS05680	-	1079177..1080024 (-)	848	Protein_1094	glycosyltransferase	-
DQM41_RS05685 (NCTC11168_01139)	waaV	1080008..1080832 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
DQM41_RS05690 (NCTC11168_01140)	waaF	1080891..1081850 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
DQM41_RS05695 (NCTC11168_01141)	gmhA	1081831..1082391 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
DQM41_RS05700 (NCTC11168_01142)	rfaE1	1082388..1083773 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
DQM41_RS05705 (NCTC11168_01143)	rfaD	1083766..1084719 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
DQM41_RS05710 (NCTC11168_01144)	gmhB	1084720..1085280 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
DQM41_RS05715 (NCTC11168_01145)	-	1085362..1085664 (+)	303	WP_002852762.1	cytochrome c	-
DQM41_RS05720 (NCTC11168_01146)	ccoS	1085687..1085893 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1138567 DQM41_RS05690 WP_002875425.1 1080891..1081850(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1138567 DQM41_RS05690 WP_002875425.1 1080891..1081850(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1