Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQM53_RS11150 Genome accession   NZ_LS483361
Coordinates   2254194..2254967 (+) Length   257 a.a.
NCBI ID   WP_111717871.1    Uniprot ID   A0A9X8T162
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2249194..2259967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM53_RS11135 (NCTC6179_02280) - 2250647..2252088 (+) 1442 Protein_2119 IS1182 family transposase -
  DQM53_RS11140 (NCTC6179_02281) rlmH 2252168..2252647 (-) 480 WP_111717867.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM53_RS11145 (NCTC6179_02282) htrA 2252857..2254077 (+) 1221 WP_111717869.1 trypsin-like peptidase domain-containing protein Regulator
  DQM53_RS11150 (NCTC6179_02283) spo0J 2254194..2254967 (+) 774 WP_111717871.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 28910.61 Da        Isoelectric Point: 9.7853

>NTDB_id=1138553 DQM53_RS11150 WP_111717871.1 2254194..2254967(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEIAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTPKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1138553 DQM53_RS11150 WP_111717871.1 2254194..2254967(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATCGTAGCCAATCCCTATCAACCAAGGCTGCAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTCTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGATTGCTAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCCAAAAAATAAAAATATTTTTATCACTT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTG
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.203

99.611

0.58


Multiple sequence alignment