Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQM53_RS08740 Genome accession   NZ_LS483361
Coordinates   1757549..1758274 (-) Length   241 a.a.
NCBI ID   WP_111717427.1    Uniprot ID   A0A9X8T1I0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1752549..1763274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM53_RS08710 (NCTC6179_01791) nusA 1752744..1753901 (-) 1158 WP_003052330.1 transcription termination factor NusA -
  DQM53_RS08715 (NCTC6179_01792) rimP 1754044..1754526 (-) 483 WP_111717421.1 ribosome maturation factor RimP -
  DQM53_RS08725 (NCTC6179_01794) trmB 1755021..1755656 (-) 636 WP_111717423.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQM53_RS08730 (NCTC6179_01795) - 1755656..1756447 (-) 792 WP_003052472.1 phosphotransferase family protein -
  DQM53_RS08735 (NCTC6179_01796) - 1756512..1757546 (-) 1035 WP_111717425.1 ABC transporter permease -
  DQM53_RS08740 (NCTC6179_01797) pptA 1757549..1758274 (-) 726 WP_111717427.1 ABC transporter ATP-binding protein Regulator
  DQM53_RS08745 (NCTC6179_01798) - 1758346..1758765 (+) 420 WP_012767493.1 HIT family protein -
  DQM53_RS08750 (NCTC6179_01799) - 1758762..1759091 (+) 330 WP_111717429.1 chemotaxis protein -
  DQM53_RS08755 (NCTC6179_01800) - 1759249..1760517 (-) 1269 WP_111717431.1 LCP family protein -
  DQM53_RS08760 (NCTC6179_01801) - 1760529..1761050 (-) 522 WP_111717434.1 N-acetyltransferase -
  DQM53_RS08765 (NCTC6179_01802) tsaE 1761043..1761486 (-) 444 WP_111717961.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQM53_RS08770 (NCTC6179_01803) - 1761664..1763124 (-) 1461 WP_111717436.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26386.62 Da        Isoelectric Point: 4.6450

>NTDB_id=1138540 DQM53_RS08740 WP_111717427.1 1757549..1758274(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLAADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDGSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1138540 DQM53_RS08740 WP_111717427.1 1757549..1758274(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGGCTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGGTTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGACGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCGAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCGTTTGGTGATGGTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743

Multiple sequence alignment