Detailed information NTG1138511

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM53_RS02005
• Genome accession: NZ_LS483361
• Coordinates: 372407..373330 (+)
• Length: 307 a.a.
• NCBI ID: WP_003057816.1
• Uniprot ID: A0A9X8T611
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 367407..378330

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM53_RS01990 (NCTC6179_00403)	amiC	368907..370409 (+)	1503	WP_111715181.1	ABC transporter permease	Regulator
DQM53_RS01995 (NCTC6179_00404)	amiD	370409..371335 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
DQM53_RS02000 (NCTC6179_00405)	amiE	371344..372414 (+)	1071	WP_111715184.1	ABC transporter ATP-binding protein	Regulator
DQM53_RS02005 (NCTC6179_00406)	amiF	372407..373330 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34796.93 Da
• Isoelectric Point: 6.4058

>NTDB_id=1138511 DQM53_RS02005 WP_003057816.1 372407..373330(+) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=1138511 DQM53_RS02005 WP_003057816.1 372407..373330(+) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACTTTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGCGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGACCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAGCGTAAAGAAAAAATTAAGAACATGA
TGGCCGAGGTTGGTTTGTTATCAGAACATTTGACTCGCTATCCTCACGAATTTTCAGGAGGGCAACGTCAACGGATTGGT
ATCGCTAGAGCTCTAGTGATGAATCCCGAGTTTGTTATTGCTGACGAACCTATCTCCGCTCTAGACGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGACTGACATATCTTTTCATCGCCCACGACCTATCAGTTG
TTCGCTTCATTTCAGATCGTATTGCGGTTATCCATAAAGGTGTTATTGTGGAGGTTGCTGAAACAGAAGAGCTGTTCAAT
AATCCTATCCACCCGTATACAAAATCTCTTTTATCAGCTGTTCCGATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAATCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTCT
GGGCTAATCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814