Detailed information NTG1138455

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM47_RS01440
• Genome accession: NZ_LS483360
• Coordinates: 266113..267036 (+)
• Length: 307 a.a.
• NCBI ID: WP_023610800.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC10876
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 261113..272036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM47_RS01425 (NCTC10876_00283)	amiC	262613..264115 (+)	1503	WP_011017334.1	ABC transporter permease	Regulator
DQM47_RS01430 (NCTC10876_00284)	amiD	264115..265041 (+)	927	WP_023610798.1	oligopeptide ABC transporter permease OppC	Regulator
DQM47_RS01435 (NCTC10876_00285)	amiE	265050..266120 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
DQM47_RS01440 (NCTC10876_00286)	amiF	266113..267036 (+)	924	WP_023610800.1	ABC transporter ATP-binding protein	Regulator
DQM47_RS10205	-	267074..267157 (-)	84	Protein_231	IS3 family transposase	-
DQM47_RS01450	-	267184..267423 (-)	240	WP_023077809.1	hypothetical protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34701.88 Da
• Isoelectric Point: 6.5113

>NTDB_id=1138455 DQM47_RS01440 WP_023610800.1 266113..267036(+) (amiF) [Streptococcus pyogenes strain NCTC10876]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYSQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1138455 DQM47_RS01440 WP_023610800.1 266113..267036(+) (amiF) [Streptococcus pyogenes strain NCTC10876]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGAATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACTCCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814