Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQM51_RS02640 Genome accession   NZ_LS483356
Coordinates   471756..472565 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8230     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 466756..477565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM51_RS02620 (NCTC8230_00520) - 467198..468445 (+) 1248 WP_002985649.1 AMP-binding protein -
  DQM51_RS02625 (NCTC8230_00521) - 468501..469535 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQM51_RS02630 (NCTC8230_00522) vicR 469697..470407 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQM51_RS02635 (NCTC8230_00523) vicK 470400..471752 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM51_RS02640 (NCTC8230_00524) vicX 471756..472565 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQM51_RS02645 (NCTC8230_00525) rnc 473008..473700 (+) 693 WP_111713163.1 ribonuclease III -
  DQM51_RS02650 (NCTC8230_00526) smc 473701..477240 (+) 3540 WP_002985636.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1138271 DQM51_RS02640 WP_002985641.1 471756..472565(+) (vicX) [Streptococcus pyogenes strain NCTC8230]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1138271 DQM51_RS02640 WP_002985641.1 471756..472565(+) (vicX) [Streptococcus pyogenes strain NCTC8230]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment