Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL02_RS00695 | Genome accession | NZ_LS483355 |
| Coordinates | 105378..106331 (+) | Length | 317 a.a. |
| NCBI ID | WP_063510179.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC12067 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100378..111331
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL02_RS00655 (NCTC12067_00132) | - | 101205..101570 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQL02_RS00660 (NCTC12067_00133) | comYA | 101663..102601 (+) | 939 | WP_023612548.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL02_RS00665 (NCTC12067_00134) | comYB | 102537..103571 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL02_RS00670 (NCTC12067_00135) | comYC | 103573..103899 (+) | 327 | WP_063510176.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL02_RS00675 (NCTC12067_00136) | comGD | 103874..104302 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| DQL02_RS00680 (NCTC12067_00137) | comGE | 104259..104543 (+) | 285 | WP_063510177.1 | competence type IV pilus minor pilin ComGE | - |
| DQL02_RS00685 (NCTC12067_00138) | comYF | 104536..104970 (+) | 435 | WP_063510178.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL02_RS00690 (NCTC12067_00139) | comGG | 104954..105280 (+) | 327 | WP_002992739.1 | competence type IV pilus minor pilin ComGG | - |
| DQL02_RS00695 (NCTC12067_00140) | comYH | 105378..106331 (+) | 954 | WP_063510179.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL02_RS00700 (NCTC12067_00141) | - | 106390..107586 (+) | 1197 | WP_063510180.1 | acetate kinase | - |
| DQL02_RS00705 | - | 107773..108081 (+) | 309 | WP_011284425.1 | hypothetical protein | - |
| DQL02_RS00710 (NCTC12067_00142) | proC | 108164..108934 (-) | 771 | WP_011284426.1 | pyrroline-5-carboxylate reductase | - |
| DQL02_RS00715 (NCTC12067_00143) | pepA | 108982..110049 (-) | 1068 | WP_011284427.1 | glutamyl aminopeptidase | - |
| DQL02_RS00725 (NCTC12067_00144) | - | 110514..110798 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQL02_RS00730 (NCTC12067_00145) | - | 110795..111112 (+) | 318 | WP_011284428.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35941.07 Da Isoelectric Point: 4.7866
>NTDB_id=1138200 DQL02_RS00695 WP_063510179.1 105378..106331(+) (comYH) [Streptococcus pyogenes strain NCTC12067]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDAIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDAIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1138200 DQL02_RS00695 WP_063510179.1 105378..106331(+) (comYH) [Streptococcus pyogenes strain NCTC12067]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGCTATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGCTATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |