Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DQL13_RS02490 Genome accession   NZ_LS483354
Coordinates   497745..498470 (+) Length   241 a.a.
NCBI ID   WP_021320421.1    Uniprot ID   A0AAW3GP69
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC11606     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 492745..503470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL13_RS02460 (NCTC11606_00488) tsaE 493352..493795 (+) 444 WP_012515075.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DQL13_RS02465 (NCTC11606_00489) - 493788..494315 (+) 528 WP_012515076.1 GNAT family N-acetyltransferase -
  DQL13_RS02470 (NCTC11606_00490) brpA 494316..495578 (+) 1263 WP_012515077.1 biofilm formation/cell division transcriptional regulator BrpA -
  DQL13_RS02475 (NCTC11606_00491) - 495742..496044 (-) 303 WP_012515078.1 hypothetical protein -
  DQL13_RS02480 (NCTC11606_00492) - 496041..496460 (-) 420 WP_012515079.1 HIT family protein -
  DQL13_RS02485 (NCTC11606_00493) - 496912..497208 (-) 297 WP_012515080.1 hypothetical protein -
  DQL13_RS02490 (NCTC11606_00494) pptA 497745..498470 (+) 726 WP_021320421.1 ABC transporter ATP-binding protein Regulator
  DQL13_RS02495 (NCTC11606_00495) - 498474..499508 (+) 1035 WP_012515083.1 ABC transporter permease -
  DQL13_RS02500 (NCTC11606_00496) ccrZ 499571..500362 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  DQL13_RS02505 (NCTC11606_00497) trmB 500362..500997 (+) 636 WP_021320423.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DQL13_RS02520 (NCTC11606_00499) rimP 502380..502862 (+) 483 WP_042670147.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=1138147 DQL13_RS02490 WP_021320421.1 497745..498470(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLGEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDLELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1138147 DQL13_RS02490 WP_021320421.1 497745..498470(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAAGGAAGGATTTCCATTGATGGTTTAACCTTGGGAGAGCATGAAGCTGATTATCGTAAGAAAATTGGCTTTATTCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTGGCTATGGCCTATGATATTGATTTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

99.17

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726

Multiple sequence alignment