Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OB04_RS20980 Genome accession   NZ_CP009796
Coordinates   4051593..4052441 (-) Length   282 a.a.
NCBI ID   WP_038429972.1    Uniprot ID   -
Organism   Bacillus subtilis strain SG6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4046593..4057441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS20960 (OB04_04118) yyaE 4047124..4049127 (-) 2004 WP_038429970.1 molybdopterin-dependent oxidoreductase -
  OB04_RS20965 (OB04_04119) yyzM 4049178..4049384 (-) 207 WP_003226838.1 DUF951 family protein -
  OB04_RS20970 (OB04_04120) - 4049478..4050494 (-) 1017 WP_010886647.1 membrane protein -
  OB04_RS20975 (OB04_04121) yyaC 4050937..4051554 (+) 618 WP_003243890.1 spore protease YyaC -
  OB04_RS20980 (OB04_04122) spo0J 4051593..4052441 (-) 849 WP_038429972.1 stage 0 sporulation protein Spo0J Regulator
  OB04_RS20985 (OB04_04123) soj 4052434..4053195 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  OB04_RS20990 (OB04_04124) yyaB 4053443..4053883 (+) 441 WP_038429973.1 PH domain-containing protein -
  OB04_RS20995 (OB04_04125) noc 4053952..4054803 (-) 852 WP_015250778.1 nucleoid occlusion protein -
  OB04_RS21000 (OB04_04126) rsmG 4054925..4055644 (-) 720 WP_038429974.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32196.14 Da        Isoelectric Point: 8.3881

>NTDB_id=113808 OB04_RS20980 WP_038429972.1 4051593..4052441(-) (spo0J) [Bacillus subtilis strain SG6]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLVQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=113808 OB04_RS20980 WP_038429972.1 4051593..4052441(-) (spo0J) [Bacillus subtilis strain SG6]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGTTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCAGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGATTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGGTTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGACGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387