Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL37_RS09240 Genome accession   NZ_LS483352
Coordinates   1774286..1774999 (+) Length   237 a.a.
NCBI ID   WP_111676868.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1769286..1779999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS09230 (NCTC12052_01821) treC 1770355..1771983 (-) 1629 WP_023610271.1 alpha,alpha-phosphotrehalase -
  DQL37_RS09235 (NCTC12052_01822) treP 1772051..1774075 (-) 2025 WP_111685868.1 PTS system trehalose-specific EIIBC component -
  DQL37_RS09240 (NCTC12052_01823) treR 1774286..1774999 (+) 714 WP_111676868.1 trehalose operon repressor Regulator
  DQL37_RS09250 (NCTC12052_01824) - 1775279..1775617 (-) 339 Protein_1728 winged helix-turn-helix transcriptional regulator -
  DQL37_RS09255 (NCTC12052_01825) - 1775803..1776660 (+) 858 WP_038432671.1 VOC family protein -
  DQL37_RS09260 (NCTC12052_01826) yaaA 1776702..1777433 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  DQL37_RS09265 (NCTC12052_01827) nrdG 1777607..1778221 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  DQL37_RS09270 (NCTC12052_01828) - 1778221..1778730 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  DQL37_RS09275 (NCTC12052_01829) - 1778739..1779674 (-) 936 WP_111685869.1 Gfo/Idh/MocA family protein -
  DQL37_RS09775 (NCTC12052_01830) - 1779703..1779849 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27594.75 Da        Isoelectric Point: 9.6307

>NTDB_id=1138070 DQL37_RS09240 WP_111676868.1 1774286..1774999(+) (treR) [Streptococcus pyogenes strain NCTC12052]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1138070 DQL37_RS09240 WP_111676868.1 1774286..1774999(+) (treR) [Streptococcus pyogenes strain NCTC12052]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTATCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTTGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment